Rhodococcus globerulus: KYT97_25940
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Entry
KYT97_25940 CDS
T07544
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03030
DNA replication
rgo03430
Mismatch repair
rgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT97_25940 (holA)
03430 Mismatch repair
KYT97_25940 (holA)
03440 Homologous recombination
KYT97_25940 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgo03032
]
KYT97_25940 (holA)
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_25940 (holA)
Enzymes [BR:
rgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT97_25940 (holA)
DNA replication proteins [BR:
rgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT97_25940 (holA)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT97_25940 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QXW01712
LinkDB
All DBs
Position
complement(5669107..5670081)
Genome browser
AA seq
324 aa
AA seq
DB search
MSTPAGLDPLHLVLGDDEFLIERAVSTLIKAVRGDRGQGISDLPITRMRAGDANAPELAE
LLSPSLFAEDRVIVLEAAAEAGKDAVALVLDAAREPSEGVVLIVLHSGGGRAKALAPALE
KLGAVVHQCAKLNKSQLTDFVRAEFSSADVKVSPAVIGAMIESVGSNLRELASACSQLAA
DTGGKIDVDAVHQYYSGRAEVSGFDVADKVIVGDTRGALEALRWADQIGTPHVLLADALA
DAVHTVAKVGPYARGGDPFRLASELGMPPWKVKKAIKEVKGWDPASIGAAMQIVAALNAD
VKGAAVDSSYALESAVRKVCALRK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgagtactccggctggcctcgacccgttgcacctcgttctcggagacgacgaattcctg
atcgaacgggcagtgtcgacgttgatcaaggccgttcgtggtgatcgtgggcagggaatc
tcggatctgcccatcacccggatgcgtgccggcgatgccaatgcgccagaacttgccgaa
ctgctcagtccgtcgctgttcgcggaagatcgtgtgatcgttctggaagcggcagcggag
gccggcaaggacgccgttgcactggtactcgacgcagcccgcgaaccgtccgaaggtgtt
gtgctgattgttctgcactccggtggtggacgcgcaaaagcactggcgcccgcgctggag
aagttgggcgccgtagttcatcagtgcgccaaactcaacaaatctcagttgaccgatttt
gttcgggccgagttttcgtccgcagatgtcaaggtttcgcccgctgtcatcggggcaatg
atcgaaagcgtcggctcgaacctgcgtgagttggcatcggcgtgttcccagttggctgca
gataccggcgggaagatcgacgtcgatgctgtccatcagtactactccggcagggccgag
gtgtcggggttcgacgtcgcggacaaagtaatcgtcggcgatacccggggcgcgctcgaa
gcacttcgctgggctgaccagatcggaaccccgcacgttcttctggccgacgccctcgcc
gacgcggtgcataccgtcgcgaaggtcggcccgtatgcccggggcggtgatccgttccga
ttggcgtcggagctcgggatgccgccgtggaaggtcaagaaggcaatcaaggaagtgaag
ggctgggacccggcgtcgatcggcgcagcgatgcagattgttgccgcgctcaacgccgat
gtgaagggtgcggccgtcgactcgtcctatgcgctggaatcagcggtgcgtaaggtctgt
gcgctgcgtaagtaa
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