Rhodococcus globerulus: KYT97_29450
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Entry
KYT97_29450 CDS
T07544
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYT97_29450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_29450
Enzymes [BR:
rgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KYT97_29450
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KYT97_29450
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYT97_29450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QXW02321
LinkDB
All DBs
Position
complement(6460735..6461601)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEALAGFLREHAVGAVVGRIDIAALSVLKTFDPPIAALQGRDVTGAARFGKHLG
LDCDGLWLITHLSRGGWMRWQDNPSSTPPKPGKGPLALRVHFFTPEGLTPACDLTEAGTK
KRLAVWIVADPLEVPGIARLGPDAMAVTEAEFADILGGTSARIKNAIVDQSLLAGVGNAY
SDEILHTARLSPFATSSRLTAEQITTLYDAMRTVLADAVERSVGQDAARLKGEKRSGMRV
HARTGLPCPVCGDVVREVSFAERSFQYCATCQTGGKPLADRRMSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaggtagaggcgctggccggatttcttcgcgaacacgcagtgggc
gctgtagtcggccgcatcgacattgccgcattgagcgtgctcaagaccttcgatccgccg
attgctgcattgcagggccgagacgtgacgggcgcagccagattcggtaaacatcttggg
ctggactgcgatgggctctggctcatcacccatctgtcgcgtggtggatggatgcggtgg
caggacaatccgtcgtcgacgccaccaaaacctggcaaaggtccgttggcgcttcgagtt
catttcttcacgccggaggggctcactcctgcttgcgatctcaccgaagccggcacgaaa
aaacgcctggcagtgtggatagtggcggacccgctggaggtgccggggatcgctcgtctg
ggacccgacgccatggccgtcaccgaagcggaatttgccgacatacttggtggtacctcc
gccaggatcaagaatgcgatagtcgaccagtcacttcttgccggcgtcgggaatgcctac
tccgacgaaatcctgcacacggcacggctttccccgttcgcgacgtcgtctcgtcttacc
gcagaacagataacaacgctgtacgacgccatgcgaaccgtgctggccgatgccgtcgag
cggtcggttggacaggacgcggcacggctgaagggtgagaagcgatcgggaatgcgggta
cacgcccgcaccggtttgccctgccccgtgtgtggtgatgtggtgcgcgaagtgtctttt
gccgagcgatccttccagtactgcgcaacctgccagaccggcggaaaaccattggcagac
aggcgaatgtcgcggctgctcaagtag
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integrated database retrieval system
