Rhodococcus gordoniae: NMQ04_00840
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Entry
NMQ04_00840 CDS
T08682
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00074
Mycolic acid biosynthesis
rgor01100
Metabolic pathways
rgor01110
Biosynthesis of secondary metabolites
Module
rgor_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
NMQ04_00840 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rgor01004
]
NMQ04_00840 (pks13)
Lipid biosynthesis proteins [BR:
rgor01004
]
Polyketide synthase
Modular PKS
NMQ04_00840 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Abhydrolase_6
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
UTT50826
LinkDB
All DBs
Position
181808..186739
Genome browser
AA seq
1643 aa
AA seq
DB search
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPADDDSALYTVGAVAGSKDIAIVGLSTRFPGNVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTKGGYLGDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSELKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRSREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDRLPPTLNYTAPNPYIP
FDSAHLKVIPEGAAWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPAHLEASEAEVEVLP
EDIPAAFEEQTEEKPETARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLVDVA
RTLARRNHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQ
HRKMAKQLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDGQDYDVETAQVGIFTIQIG
LAALLRHHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDI
RLMALVEYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVL
QTKGASHTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHDGIHDVEYWTKG
MRHSVYFTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDES
LGVLAALAQLYVHGQAVDLKTLLPEGDYADLPRTAFLRKPYWVDARIGTSGNGRAPGARV
ALPDGRYVWEVQASAVTDTAELLVAAASQVLSDVTLTASIPHTGVPATGTLTTTLTRHPG
GASLQVHANTGDGFTLVHEGVVTSGEPLPAPVAAAAKPAAQAEELPEVVESFGDKWDPNG
SQTLDDRLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAV
KDASLRDVSKYLRYAVENREEVAQLAEQQAAEKAAERASTAERDELPQVEDTTAVGEAEQ
ILAEAEAQATAEATAATEPEQESSGVDVPPRDAAERLTFASWAVITGKSAKGIFNPLPKL
DRADAERLAARLTERSEGEITVDDVLAASTVEQLAETVRQHLESADRIDGLVRTLRPRAE
GSDAVPVFVFHPAGGSTVAYEPLLRRLPARTPVFGFERTEGPIDTRAQAYLPLVEEIQGD
GPYVLCGWSLGGVLAYAVARLLREKGKDVRLVGLIDTVMAGEKVEDTPEEIRKRWQRYSA
FAKKTYGIDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSWLDNRAIQ
TADLAPYDGKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVGDLEVVHVGGDHLQIVD
EPYISKVGEDLTRKLADIEASRS
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccggccag
ccggtctcccagatctcggacgatcgtccgatggaggagttcggtctgtcctcccgggac
gccgtcgccatggcgggtgagatcgaggaactcctcggtgtcacgctgaacgcgacgatc
gcctaccagcaccccacgatcgcgtccctcgcgacgcgcatcatcgagggcgagcccgag
gcccccgccgacgacgactccgccctgtacacggtcggtgcggtggcgggttcgaaggac
atcgccatcgtcggcctgtccacccgtttcccgggcaacgtcgacacccccgaacagatg
tgggagctgctggcgtccggacgcgacggcatcagcgatctgcccgaaggccgctggtcg
gagttcgagaacgacccggcggtgtgggagtcgatccgcaacgccaacaccaagggtggc
tacctcggcgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaggtc
gagatggtcgacccgcagcagcggctcgcgctggaactcacctgggaggcgctcgagcac
gcacacatcccgccgagcgagctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgacccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgccaaccgcgtgtcgtacttctacgacttccacggc
ccgtcggtcacactcgacacggcgtgctcgtcgtcgctggtggctgtgcaccaggccgtg
cgggcgctgcgcaacggtgaggccgatgtcgccctcgccggcggcgtcaacatgctgctc
gccccggccggcaccctcggcttcgacgaactcggcgtgatggcccccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcggcggtctcgtcgtg
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacattctcgccgtcatcgccggt
tcggccgtcaaccaggacggccgttccaacggtctggccgcccccaaccccgaagctcag
gtcgacgtgctccgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcactgtgctcggcgacccgatcgaggccgacgcgctcggc
cgtgtcgtcggccgcagccgcgaggacgacaagccggtcctgctcggctcggccaagacc
aatttcggtcacctcgagtccgccgccggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgaccggctcccgccgacgctcaactacacggcgcccaacccgtacatcccg
ttcgacagcgctcatctgaaggtcatccccgagggcgcggcgtggccgcgttacaccggc
cgggccgtcgcgggtgtgtccggattcggtttcggtggcaccaacgcccatgtcgtggtg
cgcgagtacaccggccccgcccatctcgaagcctccgaggccgaggtcgaggtgctgccc
gaggacatcccggcagccttcgaggaacagacggaggagaagcccgagactgctcgggag
ctgcccgtgctgctcgccgtctcggccgcgatgccgtcacgccgccgtcgtgcggccgcc
gacctcgccgactggctcgagacggagaagggcagcacgacgccgctcgtcgacgtcgcc
cgcacgctcgcgcgccgcaaccacggccggtcccgcgcgatcgtcgtggcgagcaaccac
ggtgaggccatcgccggtctgcgtgccgtcgccgccggtaagcccgcacagggcgtgttc
accgccgacgctcccgcatccaagggcgcggtgtgggtgctgtccggtttcggtgcccag
caccgcaagatggccaagcagctgtacctcgagaacccggtcttcgccgcggccgtcgac
gaagtcgacgagctgatctacgacgagtcgggctactccatgaaggagaagttcctcgac
gacggtcaggactacgacgtcgagaccgcgcaggtcggcatcttcacgatccagatcggt
ctcgccgcgctgctgcgtcaccacggcgccgagcccgccgcggtcgtcggtcactcgatg
ggtgaggccgccggcgcctacatctcgggcggactgtcgctcgaggacgccgtgcgcgtc
atctgctcgcgctcgcgtctgatgggtgaggccgagtccggcctgaccggcgacgacatc
cgtctcatggccctcgtcgagtacagcgccgccgagatcaccgacgtgctgcccgacttc
ccgcagctcgaggtctgcgtctacgcggcgccgacccacaccgtcatcggtggcccgcag
gagcaggtcaacgcgatcgtcgcgcgtgccgaggcagaggagaagttcgcccgggtcctg
cagaccaagggcgcgagccacacctcgcaggtcgatccgatcctcggcgagctcgcggcc
gaactcgccggcatcgaaccgcaccgcctgaaggtcgacctgtactcctcggtcgaccag
gagaccctctaccgcgcaggtcacgacggtatccacgacgtcgagtactggaccaagggc
atgcgccacagcgtgtacttcacccaggcgatccggcaggccctgtccgacgggcacacc
accttcgtcgagctcaacgcgaaccctgcgacgctcatgtcggtcgcggcgacggccttc
gacgccggtgtacaggacggccagttcatccagacgctcaagcgcaaggaggacgagtcc
ctcggcgtcctcgccgccctcgcacagctgtacgtgcacgggcaggcggtcgacctgaag
accctgctgccggaaggcgattacgccgacctgccgcgcaccgccttcctccgcaagccg
tactgggtcgacgcccgtatcggcacctccggcaacggccgtgcgcccggcgcccgggtc
gccctgcccgacggccgctacgtctgggaggtgcaggcctccgccgtcaccgacacggcc
gagctgctcgtcgcggcggcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatc
ccgcacaccggcgtccccgcgaccggcaccctcaccacgactctcacccggcatccgggt
ggcgcgtcgctgcaggtgcacgcgaacaccggcgacggtttcacgctcgtccacgagggt
gtcgtcacctccggtgagccgctgcccgcacccgtcgcggctgctgcgaagcccgccgca
caggccgaggagctgcccgaggtcgtggagtcgttcggcgacaagtgggatccgaacgga
tcgcagaccctcgacgaccgcctgacgctgatcgtcgccgagtccatgggctacgcgccc
gaggacctgccggccgagatcccgctcatcgaactgggtctcgactcactcatggccgtc
cgcatcaagaaccgcgtcgagtacgagttcgacatcccgcagctgcagctgtcggcggtc
aaggacgcgagtctgcgcgacgtctcgaagtacctgcggtacgccgtcgagaatcgcgag
gaggtcgcgcagctcgccgagcagcaggccgccgagaaggcagccgaacgggcatccact
gcagaacgggacgagctcccgcaggtcgaggacaccaccgcggtgggcgaggccgagcag
atcctcgccgaggccgaagcacaagccacggccgaggcaacggcagcgaccgaacccgag
caggagtcgagcggagtcgacgtgccgccgcgcgacgccgcggaacggttgaccttcgcc
tcctgggcggtgatcaccggcaagtcggccaagggcatcttcaacccgctgccgaagctc
gaccgcgccgacgccgagcggctcgccgcccggctgaccgagcggtccgagggcgagatc
accgtcgacgacgtgctcgccgcgtcgaccgtcgagcagctcgccgagaccgtgcggcag
cacctcgaatccgccgaccgcatcgacggtctggtgcgcacgctgcggccccgcgccgag
ggatcggacgccgtgccggtcttcgtcttccaccccgcgggcggatcgaccgtcgcgtac
gagccgctgctgcgccgcctgccggcgcgcaccccggtgttcggtttcgagcgcaccgag
ggtccgatcgacacccgcgcccaggcgtacctgccgctcgtcgaggagatccagggcgac
gggccgtatgtgctgtgcggctggtcgctcggtggtgtcctcgcctacgcggtggcccgt
ctgctgcgtgagaagggcaaggacgtgcgtctcgtcggtctcatcgacacggtcatggcc
ggtgagaaggtcgaggacacgcccgaggagatccgcaagcgctggcagcgttactcggcg
ttcgcgaagaagacctacgggatcgacgcgccgctgccctacgacctgctggccgaggcc
ggcagcgacgaggagcagatcggcatcctgatggggctgctcgagttgagcggagcgcag
atccccggcggcatcatcgagcaccagcgcacgtcgtggctcgacaaccgcgcaatccag
accgcggatctcgcgccctacgacggcaaggtcgtgctgtacatggccgacaagtaccac
gacgacgcgatcgatctcgagccggccttcggcacccggcagcccgacggtgggtggggc
gaggtcgtcggagatctcgaggtcgtacacgtcggcggcgatcacctgcagatcgtcgac
gagccgtacatctcgaaggtgggggaagacctgacccgcaagctggccgacatcgaggcc
tcgaggagctga
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