Rhodococcus gordoniae: NMQ04_00935
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Entry
NMQ04_00935 CDS
T08682
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00521
Streptomycin biosynthesis
rgor00523
Polyketide sugar unit biosynthesis
rgor00541
Biosynthesis of various nucleotide sugars
rgor01100
Metabolic pathways
rgor01110
Biosynthesis of secondary metabolites
rgor01250
Biosynthesis of nucleotide sugars
Module
rgor_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NMQ04_00935 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NMQ04_00935 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NMQ04_00935 (rfbC)
Enzymes [BR:
rgor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NMQ04_00935 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTT48823
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All DBs
Position
complement(208943..209545)
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AA seq
200 aa
AA seq
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MQYRELTIAGAWEITPKQFGDDRGVFLEWFKQASFTDASGRPLELAQANCSVSAAGVLRG
IHYADVPPGQAKYVMCVSGSVLDVVVDLRVGSPTFGQWDSVLLDTKDRRAIFLSEGLGHG
FLALEDNSTVVYLCSTGYDPDREHEVNPLDPEIGIDWPTTGPDGRSLTYELSAKDRAAPT
LADARDAGRLPHFQGTSNGL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtaccgcgaactgacgatcgccggggcgtgggagatcacgccgaaacagttcggc
gacgaccggggcgtgttcctcgaatggttcaagcaggcgagtttcaccgacgcctccggc
cggcccctggagttggcgcaggcgaactgctcggtctccgccgccggggtactgcgcggc
atccactacgccgatgtgcctcccggacaagcgaagtacgtcatgtgcgtgtcggggtcg
gtgctcgacgtcgtcgtcgacctgcgggtcgggtcaccgaccttcggccagtgggattcg
gtgctgctcgacacgaaggatcgccgcgcgatcttcctgtccgagggcctcggtcacggt
ttccttgccctcgaggacaactcgaccgtcgtctacctgtgctcgacgggttacgacccc
gaccgggagcacgaggtgaacccgctcgatccggagatcgggatcgattggccgacaacg
ggacctgacggcaggtcgctgacctacgaactgtcggcgaaggaccgggcggcacccacc
ctggccgacgcccgcgacgcgggtcgtctcccgcacttccagggaacgagtaacggtttg
taa
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