Rhodococcus gordoniae: NMQ04_01200
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Entry
NMQ04_01200 CDS
T08682
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rgor
Rhodococcus gordoniae
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_01200
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NMQ04_01200
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF829
DUF559
Motif
Other DBs
NCBI-ProteinID:
UTT48870
LinkDB
All DBs
Position
complement(257017..257466)
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AA seq
149 aa
AA seq
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MASSDRPGTDPRTSARMSRQRRRDTVPEVALRRELHRRGRRFFVDRAPLPGLRRRADLVF
PRRRVAVYVDGCFWHSCPHHATYPKNNAEWWAAKLAANVQRDRDTDARLQAAGWTVVRVW
EHEDPVAAATRVEDALSSPPDTDTGPAQG
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgatcggcccgggacggatccgcgtaccagtgcgcggatgagccggcag
cggcggcgcgacaccgttcccgaagtggcgttgcgcagagaactgcatcggcgtggccgg
cggttcttcgtcgaccgtgctccactgcccggcctgcggcgacgtgccgacctggtcttt
cctcgtcgtcgggtggcggtctatgtggacggctgcttctggcacagttgcccgcaccac
gcgacctacccgaagaacaacgccgaatggtgggccgccaagctggccgccaacgtacag
cgcgaccgggacaccgacgcgcgcctgcaggctgcggggtggacggtggtgcgggtgtgg
gagcacgaagaccccgttgccgccgcgactcgcgtggaggacgctctgtcgtcgcccccg
gacacggatacagggccggcgcagggatga
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