Rhodococcus gordoniae: NMQ04_02075
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Entry
NMQ04_02075 CDS
T08682
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgor
Rhodococcus gordoniae
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgor03032
]
NMQ04_02075 (topA)
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_02075 (topA)
Enzymes [BR:
rgor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NMQ04_02075 (topA)
DNA replication proteins [BR:
rgor03032
]
Prokaryotic type
DNA Topoisomerases
NMQ04_02075 (topA)
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NMQ04_02075 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UTT49022
LinkDB
All DBs
Position
440668..443604
Genome browser
AA seq
978 aa
AA seq
DB search
MAAREKSTAGGSSGTRRLVIVESPTKARKIAPYLGRDYVVEASVGHIRDLPRGAADVPAK
YKGESWARLGVDVDHDFEPLYVVSADKKSKVSELKSLLKDADELYLATDPDREGEAIAWH
LLETLKPKVPVRRMVFHEITEPAIRAAAENTRDLDNDLVDAQETRRILDRLYGYEVSPVL
WKKVMPRLSAGRVQSVATRVIVQRERERMAFTSAEYWDIAATMDAGAGASPRSFGARLVN
VDGARVASGRDFGADGNLKSTGVVVLDEGRARRLAEALAGAALTVSSAESKPYTRKPYAP
FMTSTLQQEAGRKLRFSSERTMRTAQRLYENGYITYMRTDSTTLSESAIAAARAQATQLY
GAEFVHATPRQYTRKVKNAQEAHEAIRPAGDVFATPGELHSRLDGDEFKLYELIWQRTVA
SQMADARGTTLTLRITGTAGTGEECTFSSSGRTITFAGFLKAYVESVDEEAGGQSDDAES
RLPNLSEGASVTATKLDPDGHSTNPPARYTEASLIKTLEELGIGRPSTYASIIKTILDRG
YVYKRGSALVPSWVAFAVIGLLEAHFAQLVDYDFTAGMEDDLDEIASGHRQRTDWLTRFY
FGSDDGHEESVARKGGLKKLVGENLEDIDAREINSIRLFDDSEGREIHVRVGRFGPYLER
MITDPDDPEAEPTSQRANLPDDLPPDELTLEYAEKLFSTPQEGRVLGVDPSTGYEIVARE
GRFGPYVTELIPDPEPEPEPDVTPIPVEELGSEGEGGTKTATKKAVAKKAAKKASAKKAA
KKAGPKPRTGSLFKSMDLSTVTLDDALKLLSLPRVVGADPESGDEITAQNGRYGPYLKKG
TDSRSLANEEQIFTVTLEEALKIYAEPKRRGRQAAATPPLRELGTDPVSGKPMVIKDGRF
GPYVTDGETNASLRKGDEVTTITDERASELLADRRARGPAKKTAKKTAAKKTPAKKTAAK
KTAAKKTTKKAAAKKTTD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgggagaagagcactgcgggcggttcgtcgggcacgcgtcggctcgtgatc
gtcgagtccccgaccaaggcgaggaagatcgccccctacctcggccgcgactacgtcgtc
gaggcctcggtcgggcacatccgcgacctgccgcgtggtgccgcggacgtcccggccaag
tacaagggcgagtcgtgggcgcgcctcggtgtcgacgtcgaccacgacttcgaaccgctc
tacgtcgtcagcgccgacaagaagtccaaggtctcggaactgaagagcctgctcaaggac
gccgacgagctctacctcgccaccgaccccgaccgcgagggcgaggccatcgcctggcac
ctgctcgaaaccctcaagcccaaggtgcccgtccggcgcatggtcttccacgagatcacc
gagcccgcgatccgcgcggccgccgagaacacccgcgacctcgacaacgacctggtcgac
gcgcaggagacccgccgcatcctcgaccgcctgtacggctacgaggtcagcccggtgctg
tggaagaaggtcatgccccgcctgtcggcgggtcgcgtgcagtccgtggcgacccgcgtg
atcgtccagcgcgaacgcgagcgcatggcgttcacgtccgccgagtactgggacatcgcg
gccacgatggacgccggtgccggcgcaagcccccgctcgttcggtgcccgcctggtcaac
gtcgacggagcgcgggtcgcgtcgggtcgtgatttcggcgccgacgggaacctgaagtcg
accggcgtcgtcgtcctcgacgagggccgtgcccgccgcctcgcggaggcactcgccggt
gccgcgctgacggtgtcgtcggccgagagcaagccgtacacgcgcaagccgtatgccccg
ttcatgacgtcgacgctgcagcaggaggcgggccgcaagctgcggttctcgtccgagcgc
acgatgcgcacggcgcagcgcctgtacgagaacggctacatcacctacatgcgtaccgac
tccacgacgctgtcggagtcggcgatcgcggcggcccgcgcacaggccacccagttgtac
ggcgccgagttcgtccacgcgacgccgcgccagtacacccgcaaggtcaagaacgcgcag
gaagcgcacgaggcgatccgtcccgccggcgacgtcttcgccacccccggcgagctgcac
tcgcgtctcgacggcgacgagttcaagctctacgagctcatctggcagcgcacagtcgcc
tcccagatggccgatgcgcggggcacgacgctcacgttgcgcatcaccggcaccgcgggc
accggcgaggagtgcaccttctcgtcgtcgggtcgcaccatcactttcgcgggcttcctg
aaggcctatgtcgaaagtgtcgacgaggaggcaggcggacagtcggacgatgcggagtcg
cgtctgccgaacctgtccgagggcgcgtccgtcaccgcgacgaagctcgatccggacggt
cactccacgaatccgcccgcccgatacaccgaggcgagcctgatcaagacgctcgaggag
ctcgggatcggccggccctcgacctacgcgtcgatcatcaagacgatcctcgatcgcggc
tacgtctacaagcgcggcagtgcactcgtgccctcgtgggtggcgttcgccgtgatcggc
ctgctcgaggcgcacttcgctcagctcgtcgactacgacttcacggccgggatggaggac
gatctcgacgagatcgcctccggtcaccggcagcgcaccgattggctgacgcggttctac
ttcggcagcgacgacggtcacgaggaatcggtcgcccgcaagggtggtctgaagaagctg
gtgggggagaacctcgaggacatcgatgcccgcgagatcaactccatccgcctgttcgac
gactccgagggtcgcgagatccacgtgcgggtgggccggttcggtccgtatctcgaacgg
atgatcaccgatcccgacgatcccgaggccgagccgacctcgcagcgcgccaacctgccc
gacgaccttccgccggacgagctcaccctcgagtacgccgagaagctcttctcgacgccg
caggaagggcgtgttctcggtgtcgatccgtccaccggctacgagatcgtcgcgcgtgag
ggccgcttcggtccctacgtcaccgaactgatccccgacccggaacccgagcccgagccc
gacgtcacgcccatccccgtcgaggaactcgggtccgagggggagggcggcacgaagacc
gccaccaagaaggccgtcgcgaagaaggcagcgaagaaggcttcggccaagaaggccgcc
aagaaggccggcccgaagccgcgcacgggttcgctgttcaagtcgatggacctgtccacg
gtcaccctggacgacgccctgaaactgctgtcgctgccgcgcgtggtgggtgccgatccg
gagtccggcgacgagatcaccgctcagaacggccgctacggtccgtacctgaagaagggc
accgactcgcggtcgctcgcgaacgaggagcagatcttcaccgtcaccctcgaggaggcg
ctgaagatctacgcggaacccaagcggcgcggccggcaggccgcggccacaccgccgctg
cgcgagctgggcaccgacccggtgagcggcaagccgatggtgatcaaggacggccgcttc
ggcccgtacgtcaccgacggtgagaccaacgcgagcctccgtaagggcgacgaggtcacg
acgatcaccgacgagcgggcgtcagaactgctcgccgaccgtcgcgcgcgcggcccggcc
aagaagaccgcgaagaagacggcggcgaagaagacccccgccaagaagacggcggccaag
aaaacggccgccaagaagacgacgaagaaggccgcagcgaagaagacgaccgactga
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