Rhodococcus gordoniae: NMQ04_04555
Help
Entry
NMQ04_04555 CDS
T08682
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03420
Nucleotide excision repair
rgor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NMQ04_04555 (pcrA)
03430 Mismatch repair
NMQ04_04555 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_04555 (pcrA)
Enzymes [BR:
rgor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMQ04_04555 (pcrA)
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMQ04_04555 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NMQ04_04555 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
OstA_2
DEAD
ResIII
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UTT49482
LinkDB
All DBs
Position
961534..963912
Genome browser
AA seq
792 aa
AA seq
DB search
MNTPVALAHSRPGSDALLEGLNPQQREAVTHEGAPLLIVAGAGSGKTAVLTRRIAYLLAE
RGVAPGQVLAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLTGMN
SNFTIYDADDSRRLLTMIAKDLELDSKKYSARLLSTQISNLKNELIGPDEAAHEAETDSA
ATELTRVVARVYAHYQQRLRTANAFDFDDLIGETVALLQAHPQVAEYYRRRFRHVLVDEY
QDTNHAQYVLVRTLVGDPEEESAVPPSELCVVGDADQSIYAFRGATIRNIEEFERDYPQA
RTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELITGYVADNEHDEARFVA
AEIDRLVDGGDTTYSDIAVFYRTNNASRAFEDVFIRHGVPYKVVGGVRFYERKEVRDVVA
YLKVLDNPDDTVSLRRILNTPRRGIGDRAEACVAVHAERLGVSFGQALIDAAAGKVALLN
TRAQKAIAGFVEMMDGLRTMLVASDADGNDMVDIGDVVDAILERTGYSAELSASDDPQDG
ARLDNLHELVSVAREFSADVRNAAGIVDDEREEGDPEPGSLAAFLEKVSLVADADQIPEN
EAGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGLTRARRR
LYLSRAVLRSSWGQPLTNPESRFLQEIPQHLIDWRRLESTPARGQAIGSGTGSRFGAGEG
RGSSSTPSFGAARGRNNHLVLDVGDRVSHDKYGLGTVLETRGSGPTATVVIDFGSAGKVR
LMLVGGVPMVKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcccgtcgcactcgcacactcccgccccggatccgatgctcttctcgaaggg
ctcaatccgcagcagcgggaagcggtcacgcacgaaggagccccgctgctcatcgtcgcg
ggtgccggctccggcaagacggccgtgctcacgcgacgcatcgcctatctgctggccgag
cgcggcgtcgcccccggtcaggtgctcgccatcacgttcaccaacaaggctgccgccgag
atgcgcgagcgggtggcggccctggtggggccgcgcgcgaacgcgatgtgggtctcgacc
ttccactccagctgtgtccggatcctccgcgcccaggccgctctgctcacgggcatgaat
tcgaatttcacgatctacgacgccgacgactcccgtcgtctgctcacgatgatcgcgaag
gatctcgaactcgacagcaagaagtactccgcgcggctgctgtccacgcagatctcgaac
ctgaagaacgagctgatcgggcccgacgaggccgcgcacgaggcggagaccgattcggcg
gccaccgaactcacccgcgtcgtcgcgcgggtctacgcgcactaccagcagcgcctgcgc
acggcgaacgccttcgacttcgacgacctcatcggcgagacggtggcgctgctgcaggca
catccgcaggtcgccgagtactaccggcgccggttccgtcacgtgctcgtcgacgagtac
caggacaccaaccacgcgcagtacgtgctggtgcgcaccctcgtaggcgatccggaggag
gaatctgccgttcccccgagcgaattgtgcgtggtgggcgacgccgaccagtcgatctac
gccttccgcggcgccacgatccgcaacatcgaggagttcgagcgcgactatccgcaggcc
cgcacgatcctgctcgaacagaactaccgctccacccagaacatcctgtcggcggcgaat
tccgtgatctccaagaacacgggtcgccgcgagaagcggttgtggaccgattcgggcgag
ggtgaactcatcaccggttacgtcgccgacaacgagcacgacgaggcccggttcgtcgca
gccgagatcgaccggctcgtcgacggcggcgacaccacctattccgacatcgcggtgttc
taccgcaccaacaatgcctcccgtgcgttcgaggacgtcttcatccggcacggagtgccc
tacaaggtcgtcggcggggtgcggttctacgagcgcaaggaggtgcgcgatgtcgtcgcg
tacctgaaggtgctcgacaatccggacgacacggtgagcctgcggcgcattctcaacacc
cctcgtcgcggtatcggtgatcgcgccgaggcgtgtgtggcggtccacgccgagcgcctg
ggtgtgagtttcgggcaggcactcatcgacgccgctgccggcaaggtcgcgctgctgaac
acgcgggcgcagaaggcgatcgccggattcgtcgagatgatggacggcctgcggacgatg
ctcgtcgcgagcgacgccgacggcaacgacatggtcgacatcggcgatgtggtcgatgcg
atcctcgaacgcaccggatacagcgccgagttgtcggcgagcgacgatccccaggacggc
gcccgtctcgacaaccttcacgaacttgtcagcgtggcaagggaattcagtgccgacgtt
cgcaacgcggccgggatcgtcgacgacgaacgcgaggagggcgatcccgaaccgggatca
ctcgcagcgttcctcgagaaggtctcgctcgtcgccgacgccgaccagatccccgagaac
gaggccggcgtcgtcacgctgatgacgctgcacaccgcgaagggtctcgagttcccggtc
gtcttcgtcaccggctgggaggacggccagttcccgcacatgcgcgccctcggagatccg
gccgagctgtccgaggaacgacgtctcgcgtatgtgggtctcacccgggcccggcgtcgt
ctctacctctcgcgggccgtattgcgctcgtcctgggggcagccgctcaccaatccggaa
tcccgtttcctgcaggagattccgcaacatctcatcgactggcgacgcctcgagtccaca
cctgcacgcgggcaggcgatcggttcgggcacgggttcacgcttcggtgcgggcgagggg
cggggttcgtcgagcaccccgagtttcggtgcggcgcgcggacgcaacaaccacttggtg
ctcgacgtcggcgatcgcgtcagtcacgacaagtacggtctgggaacggttctcgaaacc
cgcgggtcgggccccacggctaccgtcgtgatcgatttcggtagtgccggcaaggtgcgg
ctgatgctggtcggcggtgtgccgatggtgaagctctag
DBGET
integrated database retrieval system
