Rhodococcus gordoniae: NMQ04_05350
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Entry
NMQ04_05350 CDS
T08682
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00260
Glycine, serine and threonine metabolism
rgor00460
Cyanoamino acid metabolism
rgor00630
Glyoxylate and dicarboxylate metabolism
rgor00670
One carbon pool by folate
rgor00680
Methane metabolism
rgor01100
Metabolic pathways
rgor01110
Biosynthesis of secondary metabolites
rgor01120
Microbial metabolism in diverse environments
rgor01200
Carbon metabolism
rgor01230
Biosynthesis of amino acids
rgor01240
Biosynthesis of cofactors
rgor04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NMQ04_05350
09102 Energy metabolism
00680 Methane metabolism
NMQ04_05350
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NMQ04_05350
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NMQ04_05350
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NMQ04_05350
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NMQ04_05350
Enzymes [BR:
rgor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NMQ04_05350
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UTT49630
LinkDB
All DBs
Position
1127045..1128340
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AA seq
431 aa
AA seq
DB search
MTAAPGADVNTAALNDLDPEVAEAMAGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCENVDIVEDLARNRAKELFGAEFANVQPHSGAQANAAVLMALMTPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVASYGVSKDDHRIDMDEVRDIAVREKPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSTTVHKTLGG
PRSGLILAKQEWAKKINSAVFPGQQGGPLMHAIAAKAVALKIAAGDEFKDRQQRTLSGAR
IIAERLSQSDVADKGISVLTGGTDVHLVLVDLRNSQLDGQQGEDALHEVGITVNRNAVPF
DPRPPMVTSGLRIGTPALATRGFGDEQFTEVAEIIAQTLIGGADAESLRTRVSALAQSVP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcgcccggcgccgacgtgaacactgccgcactgaacgacctcgacccggag
gtcgccgaggccatggccggcgagttgtcgcgtcagcgcgacacgctcgagatgatcgcg
tcggagaacttcgtgccgcgcgccgtgctgcaggcccagggcagcgtcctgaccaacaag
tacgccgagggttaccccggccgccgctactacggcggctgcgagaacgtcgacatcgtc
gaggacctcgcccgtaaccgcgccaaggagctgttcggcgccgagttcgcgaacgtccag
ccgcactcgggcgcgcaggcgaacgccgcggtgctcatggcgctgatgacgcccggcgag
aagctgctcggcctcgacctcgcgcacggcggccacctcacgcacggcatgaagctcaac
ttctccggcaagctgtacgacgtcgcgtcctacggggtcagcaaggacgaccaccgtatc
gacatggacgaggtccgcgacatcgccgtgcgcgagaagccgaaggtcatcgtcgccggc
tggtccgcctacccgcgtcacgaggacttcgcggccttccgctccattgccgacgaggtc
ggtgcgtacctgtgggtcgacatggcgcacttcgccggcctggtcgccgcggggttgcac
ccctcgcccgtgccctatgccgacgtcgtctccaccactgtgcacaagaccctcggtggt
ccgcgttccggcctgatcctcgccaagcaggagtgggcgaagaagatcaactcggctgtc
ttccccggtcagcagggcggaccgctgatgcacgccatcgctgcgaaggccgtggcgctg
aagatcgccgccggcgacgagttcaaggaccgtcagcagcgcaccctgtccggtgcccgg
atcatcgccgagcgcctgtcgcagtccgatgtcgccgacaagggcatctcggtgctcacc
ggcggcaccgacgtgcacctggtcctggtcgacctgcgcaactcgcagctcgacggccag
cagggtgaggacgcgctccacgaggtcggcatcaccgtcaaccgcaacgccgtgccgttc
gacccgcggcccccgatggtcacctcgggtctgcgcatcggcactccggcgctcgcgacc
cgcggtttcggcgacgaacagttcaccgaggtcgccgagatcatcgcgcagacgctcatc
gggggcgccgacgccgagtcgctgcgcacccgcgtgagcgccctggcacagtccgtgccg
ctgtacgagggcctcgaggactggcgtctgatctga
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