Rhodococcus gordoniae: NMQ04_05565
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Entry
NMQ04_05565 CDS
T08682
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NMQ04_05565 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_05565 (recC)
Enzymes [BR:
rgor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NMQ04_05565 (recC)
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NMQ04_05565 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UTT49672
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All DBs
Position
1167372..1170665
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AA seq
1097 aa
AA seq
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MLILHRAERTGILADALAEVLAKPLDDPFAREVVAVPARGVERWLTQRLSGTLGSSDGDG
VAANIDFPSPPRLVDEALAAASGIAAADDPWHPSRMLWSLLGVIDECVDEAWCATLARHL
GHGADDHRSGRRYATAAHLARLMRSYGLQRPGMIARWAAGEDVDGTGAPLDDHLRWQAEL
WRRLRARIGVDSPSQRLDELCGRLRDHPGVVDLPERLSIFGPTRLDTVLVDVLSALGHHR
DVHIWLPHPSPAMWDGSVRRPASMRRADDHSALGVQHPLLAALGRDVRELQSRLSGLDCT
DLLHASPPPPVTLLGRLQADLRDDRTPVHGSAEPDGTVMIHACHGPTRQVEVLRECLLHL
FRDDPTLEPRDVIVMCPDVETYAPLVHAAFGAGVGEHPGHTLRVRLADRGLRRTDPVLSV
VSGLLALADGRVTASEILDLAASAPVRQKFGFDDDRLERLQEWTTEAGARWGLGPWQRKS
FGLGDFMQNTFGAALDRILLGVAADGTDGEWLSLSLPLDDVDSNDIDLAGRFAEFIDRLT
VVLLRLRGPHPAARWADELGYGIDLLTDVPAADAWQLTRARREIGEAVEHAGDTQLSLSD
VRSMLASRLAGRPTRSNFRTGELTVCTMVPMRSVPHRVVVLLGLDDDVFPRSAHIDGDDV
LTQNPCVGERDPRSEDRQLLLDALMAAEERVLLFHTGADAVTGALRPPAIPLTEVRDVVA
TMTGVEVDDDRIVRRHPLQPFDPRNFRADDPFGFGVTALAGARAGQGGSEVRDRSGALLL
DDLPAPARTDVDLDELVAFLTHPTQGFLRQRLGLRIPDTDEGIADALDVELDGLAQWQLG
DRMLEARLAGMSAGAFQDAEWRRGTLPPFALGRKTLDAVSDNVERLVHACAGVHTGRART
VDIRVDLGDGRRLTGTVGGVHDEVLARSTYSKLSPKHRLEAWIRLLAVVASGHPGHWRAV
TTGRSRSRSYPAWRSTLRAPDDAVEVLTALVDLRDRGLCRPLPLVTGTSAEYAERRHRGD
SVEMALSAASKSFGGAFGDRKDRHVRYLYGPDVTIGQLTAEAPAGAEAGWFDDPTRFGVL
ARRLWEPLLASENQGRP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatactgcaccgtgccgagcgcaccggcatccttgcggacgcgctggccgaggtg
ctcgcgaaacccctcgacgacccgttcgcgagagaggtcgtcgcggtgcccgcgcgcggt
gtcgaaaggtggctcacccagcggttgtcgggcacgctcggttcctccgacggcgacggg
gtggccgcgaacatcgacttcccgtccccgccccgcctcgtcgacgaagcgctcgctgcc
gcctccggcatcgccgccgccgacgacccgtggcacccctcccgcatgctgtggtcgctg
ctcggcgtgatcgacgagtgtgtcgacgaagcgtggtgcgccactttggcgcgccatctc
ggtcacggcgcggacgaccatcggtccgggcgccggtacgccacggccgcgcatctcgcc
cgcctgatgcgcagctacggactccagcgccccgggatgatcgcccggtgggcggccggg
gaggatgtcgacggcacgggtgccccgctcgacgatcatctccggtggcaggcggagttg
tggcgacgtctgcgcgcgcgcatcggcgtcgacagcccgtcgcagcgactcgacgaactg
tgcggccggttgcgggaccacccgggcgtcgtcgatctgccggagcggctctcgatcttc
ggtcccacccggctcgacaccgtcctcgtcgacgtgttgtccgcgctcgggcatcaccgc
gacgtgcacatctggttgccgcacccgagtccggcgatgtgggacgggtccgtccggcgc
ccggcgtcgatgcgccgcgccgacgatcacagtgccctcggggtgcagcatccgttgctc
gccgcgctgggccgcgacgtgcgcgaactccaaagccggctctccggcctcgactgcacc
gacctcctgcacgcttcgccccctccgccggtgactctcctcggtcggttgcaggccgat
ctccgggacgaccggactcccgtgcacggatcggccgaacccgacggaaccgtgatgatc
catgcgtgccacggccccacccggcaggtcgaagttctccgcgagtgcctgttgcatctg
ttccgcgacgaccccactctcgaaccgcgcgacgtcatcgtcatgtgccccgatgtcgag
acgtacgccccactcgtccacgcggccttcggcgccggggtgggggagcatcccggtcac
acgctgcgggtccgcctcgccgatcgcggtctgcgccggacagacccggtgctgtcggtg
gtctccggactcctcgcgctcgccgacggccgggtcaccgccagcgagattctcgacctc
gccgcctcggctccggtgcgccagaagttcggattcgacgacgatcgactcgagcgcctg
caggagtggaccaccgaggccggtgcccgctggggcctcgggccgtggcagcgcaagagc
ttcggtctcggcgatttcatgcagaacaccttcggtgcggcactggatcgcatcctgctc
ggtgtcgccgccgacggcacggacggggagtggctgtcgctgtcgttgcccctcgacgac
gtcgacagcaacgacatcgacctagccggacggttcgccgagttcatcgaccggttgacg
gtggttctgctccggttgcgcggaccgcaccccgcggcgcggtgggcggacgaactcggt
tacggcatcgaccttctcaccgatgtccccgcggccgacgcatggcagctcacgcgcgcg
cgtcgcgagatcggcgaggccgtcgagcatgccggcgacacgcagttgtccctgagcgat
gtccggtccatgctcgcctcccggctcgcggggcgcccgacgcgctcgaacttccggacg
ggcgaactcacggtgtgcaccatggtgccgatgcgctcggtgccgcatcgcgtcgtggtg
ctcctcggtctcgacgacgacgtcttcccgcgctcggcgcacatcgacggcgacgatgtc
ctgacccagaatccctgtgtgggagaacgcgatccgcgcagcgaggatcggcagctactc
ctcgacgcactgatggccgcggaggagcgggtgttgctgttccacaccggtgccgacgcc
gtcaccggagcactgcgcccaccggcgattccgctcacggaggtgcgcgacgtggtggcg
acgatgaccggcgtcgaggtcgacgacgaccggatcgtgcggcgtcatccgttgcagccg
ttcgatccgcgcaacttccgtgccgacgacccgttcggcttcggtgtcaccgcactggcg
ggagcgcgtgccggacagggcggttcggaggtgcgagaccgatcgggtgcgctgctcctc
gacgatcttccggccccggcgcgcaccgatgtcgatctcgacgagctcgtcgccttcctg
acacatcccacccagggattcctccggcagcggctcggcttgcggattcccgacaccgac
gagggcatcgccgacgcgctcgacgtcgaactcgacggtctcgcgcagtggcagctgggc
gaccgcatgctcgaagcgcggttggcgggcatgtccgcgggggccttccaggacgcggag
tggcgtcgcggcacgctgccgcccttcgcgctcggccggaagaccctcgacgcggtgagc
gacaacgtcgaacgtctcgtgcacgcctgtgccggggtgcacaccggtcgggcccgcacc
gtcgacatccgtgtggatctcggcgacgggcgtcggctcaccggcacggtgggcggtgtt
cacgacgaggtactcgcccgcagtacgtactccaagctgtcgccgaaacatcgcctggaa
gcgtggatccggttgctcgccgtcgtcgcatcgggccatccggggcactggcgagcggtg
accaccggacgcagccggtcgcggtcgtatccggcctggcgctcgaccctccgtgccccg
gacgacgccgtcgaggtgctcaccgcactggtcgatctgcgcgaccgcggactgtgccgg
ccgctgccgctggtgacgggcacctcggccgagtacgccgagcgccgccaccgcggcgat
tccgtggagatggcgctgtcggcggcctcgaagtcgttcggcggcgcgttcggcgacagg
aaggaccggcacgtgaggtatctgtacgggcccgacgtgacgatagggcagctcaccgcc
gaggccccggccggtgccgaggccggctggttcgacgacccgacccgtttcggtgtgctc
gcccggcggttgtgggagcctctgctcgcctccgagaaccaggggcgcccgtga
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