Rhodococcus gordoniae: NMQ04_05820
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Entry
NMQ04_05820 CDS
T08682
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NMQ04_05820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_05820
Enzymes [BR:
rgor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NMQ04_05820
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NMQ04_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UTT49718
LinkDB
All DBs
Position
complement(1222314..1223090)
Genome browser
AA seq
258 aa
AA seq
DB search
MIPPSGRGPLHGAPPATLAELDDVLVDCRACPRLVAWREQVAREKRAAFRDEEYWGRPVP
GFGPADASLLIVGLAPAAHGGNRTGRMFTGDRSGDVLYAALYDAGLASQPTATHIGDGLE
LFGTRITSPVHCAPPANRPTVVERDTCRHWLEQELDLLSPTLRAVVVLGGFGWQALLPVL
SAAGWTIPVPRPKFGHGAHALLSPTEAREHPLHLFGCYHVSQQNTFTGRLTQEMVTDVLR
DAARAASLLPREPLPPPE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgatccctccctcgggacggggacccctgcacggcgcccctcctgcgacgctggccgaa
ctcgacgatgtgctcgtcgactgccgcgcgtgtccgcggctggtcgcatggcgcgagcag
gtcgcgcgggagaaacgagcagccttccgcgacgaggagtactggggccggcccgtcccg
ggtttcggtcctgccgatgcgtccctgctgatcgtcgggcttgcgcccgccgcgcacggc
gggaaccgcacgggacggatgttcaccggcgaccggtcgggcgacgtgctgtacgcggcc
ctgtacgacgcgggtctggcgtcgcagccgaccgcgacgcacatcggcgacggcctcgaa
ctgttcggcacgcgcatcacgtccccggtgcactgcgcaccgccggcgaatcgccccacc
gtcgtcgaacgcgacacctgccggcactggctggaacaggagctcgacctgctctccccc
acgctgcgcgcggtcgtcgtcctcggcggtttcggatggcaggcgctactgcccgtcctg
tcggccgcggggtggacgattcccgttccccgcccgaagttcgggcacggcgcgcacgcg
ctgctgtctccgaccgaggcgcgcgagcacccgttgcatctgttcggctgctatcacgtc
agccagcagaacaccttcaccggccggctgacgcaggagatggtgaccgacgtgctcagg
gacgcggctcgggctgcgtcgctcctaccgcgcgagccgctcccaccgcccgagtga
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