Rhodococcus gordoniae: NMQ04_05885
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Entry
NMQ04_05885 CDS
T08682
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00300
Lysine biosynthesis
rgor01100
Metabolic pathways
rgor01120
Microbial metabolism in diverse environments
rgor01230
Biosynthesis of amino acids
Module
rgor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NMQ04_05885 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rgor01002
]
NMQ04_05885 (dapE)
Enzymes [BR:
rgor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NMQ04_05885 (dapE)
Peptidases and inhibitors [BR:
rgor01002
]
Metallo peptidases
Family M20
NMQ04_05885 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UTT49728
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Position
1237583..1238659
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AA seq
358 aa
AA seq
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MPVPQLDLHADPVELTAALVDIPSVSRDETLIADAVEAALREQTDGFEIVRNGNCVLART
NRGLGSRVMLAGHLDTVPIADNVPSRRDGDLLWGCGTSDMKAGDAVFLHLAATVTDPAHD
LTIVMYDCEEIAASFNGLGRIETELRDWLDADVAILGEPTSGEIEAGCQGTLRVRITTDG
VRAHSARSWLGDNAIHKLAPVLDRLSRYEARSVDIDGCVYREGLSAVRIEGGVAGNVVPD
AAALDVNFRFAPDRSPDDALAHVREVFDGLAISIELTDMSPGALPGLSNPAAAALVEAAG
GKFRAKYGWTDVSRFAALGIPAVNYGPGDPNLAHKRDEHVEIGRITEVTSVLRSYLTR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtaccgcagttggacctgcacgccgaccccgtcgaactgaccgccgcgctcgtc
gacatcccgagtgtgtcccgggacgagacgctcatcgccgacgccgtggaggcggccctg
cgggagcagaccgacggcttcgagatcgtgcgcaacggcaactgtgtcctggcgcggacg
aaccggggactcggcagccgcgtgatgctcgccgggcacctcgacaccgtcccgatcgcc
gacaacgtgccgtcgcgacgcgacggcgacctgctgtggggatgcggcacctccgacatg
aaggccggcgacgccgtcttcctgcacctcgccgcgaccgtcaccgatcccgcccacgac
ctgacgatcgtgatgtacgactgcgaggagatcgcggcgtcgttcaacgggctcgggcgg
atcgagaccgaactgcgcgactggctcgacgcggacgtcgcgatcctgggcgaacccact
tccggtgagatcgaggccggttgccagggcacgctgcgggtgcggatcaccaccgacggc
gtgcgggcgcattcggcgcgctcctggctcggcgacaacgcgatccacaagctcgctccc
gtgctcgaccgtctgtcccggtacgaggcgcggtcggtcgacatcgacggctgtgtgtac
cgggaaggactgtcggccgtgcgcatcgagggtggtgtcgccgggaacgtggtgcccgac
gcggccgcgctcgacgtgaatttccggttcgctccggatcgcagccccgacgacgctctc
gcgcacgtccgcgaggtgttcgacggtctcgcgatctcgatagaactcaccgacatgtcg
ccgggcgcgctgcccggactgtcgaatccggcggcggccgcgctcgtcgaggcggcgggt
gggaagttccgggccaagtacggctggaccgacgtctcgcggttcgcggcgctgggcatt
ccggccgtcaactacggcccgggcgatcccaacctggcacacaagcgcgacgagcacgtc
gagatcggacggatcaccgaggtgacctccgttctgcgctcctatctcacgcgatag
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