Rhodococcus gordoniae: NMQ04_07725
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Entry
NMQ04_07725 CDS
T08682
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NMQ04_07725 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgor03019
]
NMQ04_07725 (orn)
03009 Ribosome biogenesis [BR:
rgor03009
]
NMQ04_07725 (orn)
Messenger RNA biogenesis [BR:
rgor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMQ04_07725 (orn)
Ribosome biogenesis [BR:
rgor03009
]
Eukaryotic type
Pre-60S particles
RNases
NMQ04_07725 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UTT50055
LinkDB
All DBs
Position
complement(1665510..1666109)
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AA seq
199 aa
AA seq
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MQDKLVWIDCEMTGLRLGSDKLIEIAALVTDSDLNVLGEGVDIVIHADDDALADMPAVVQ
QMHERSGLTEEVRRSTVSLAEAEKQVLAYIREHVTEAGTAPLAGNSIATDRAFITRDMPE
LDNYLHYRMVDVSSIKELCRRWYPRIYFGQPEKGLSHRALADIKESIRELRYYRRTAFVA
PPGPAPADLAAVVKDLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaactcgtatggatcgactgtgagatgacggggctgcgtctcggcagcgac
aaattgatcgagatcgcagctctggtcaccgacagtgatctcaacgtgctcggcgagggc
gtggacatcgtcatccacgccgatgacgacgccctcgccgacatgccggcggtcgtgcag
cagatgcacgagcggtccgggctcaccgaggaggtgcggcgctcgacggtcagcctcgcc
gaggcggagaagcaggtcctcgcgtacatccgcgagcacgtcaccgaggccggcacggcc
ccgctggcgggcaactccatcgcgaccgaccgcgcattcatcacccgcgacatgcccgag
ctcgacaactacctgcactaccgcatggtggacgtcagctcgatcaaggagctgtgccgg
cgctggtatccgcgcatctacttcggccagccggagaagggactgtcgcaccgggcactc
gccgacatcaaggagtcgatccgcgaactgcgctactaccgacgcacggcgttcgtggcg
ccccccggccccgccccggccgacctcgcagccgtcgtgaaggacctgggaccggcctga
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