Rhodococcus gordoniae: NMQ04_09960
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Entry
NMQ04_09960 CDS
T08682
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NMQ04_09960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_09960
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NMQ04_09960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UTT50450
LinkDB
All DBs
Position
complement(2145341..2146360)
Genome browser
AA seq
339 aa
AA seq
DB search
MRSIWKGSLAFGLVNVPVKVYSATESHDITFHQVHAKDGGRIKYQRVCTECGEVVPYQEI
DKAYDSEDGERVVLTDEDFEKLPAAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYGLLAATLEQSDRTALVHFTLRQRTRLAALRTRDGLLILQTLLWPDEVRAAEFESLDDI
EKPKQRELAMAETLVESMSDDFDPTEFTDEYQVELRTLIDEALARGGEKVFQVAEPDTDE
EDAEVLDLVAALQRSVDAAGKKVPSGSSSDGKKSSKDDEDDEGAKKKAPAKKTASKSTAK
KSPAKKSTAKKTASTSTAARKSPAKKTAAKKTSGERKGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgatctggaaaggctcactcgcgttcggcctcgtcaacgtgccggtgaaggtg
tactcggccaccgagtcgcacgacatcaccttccaccaggtgcatgcgaaggacggcggg
cggatcaagtaccagcgcgtgtgtaccgagtgcggtgaggtcgttccctaccaggagatc
gacaaggcctacgactccgaggacggcgagcgggtcgtgctcaccgacgaggacttcgag
aagcttcccgcggcggagaagcacgagatcccggtcctgcagttcgtgcccaccgaacag
atcgatccgatcctgttcgagaagtcctactatctcgagcccgattcgtcgtcgccgaag
gcctacggcctgctcgccgcgaccctcgagcagagcgaccggacggcgctggtgcacttc
acgcttcgtcagcgcacgcgactggcggcgctgcgcacccgcgacgggttgctcatcctg
cagaccctgctgtggcccgacgaggtacgcgcggccgagttcgagtcgctcgacgacatc
gagaagccgaaacaacgcgaactcgcgatggccgagaccctcgtcgaatcgatgtccgac
gatttcgatcccaccgagttcaccgacgaataccaggtggagctgcgcacgctgatcgac
gaggccctcgcgcgcggtggcgagaaggtcttccaggtcgccgaacccgacaccgacgag
gaggacgccgaggtgctcgacctcgtcgctgccctgcagcgcagcgtcgacgcggcgggt
aagaaggttccgtccggttcgtcctcggacgggaagaagtcctcgaaggacgacgaagac
gacgagggcgcgaagaagaaggctcccgcgaagaagaccgcatcgaagagcacggcgaag
aagagtcccgcgaagaagagcaccgcgaagaagaccgcgtccacgagtacggcggccagg
aagagtcctgcgaagaagacagctgccaagaagacctccggcgaacgcaaaggcgcctga
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