Rhodococcus gordoniae: NMQ04_11930
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Entry
NMQ04_11930 CDS
T08682
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor03030
DNA replication
rgor03410
Base excision repair
rgor03420
Nucleotide excision repair
rgor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMQ04_11930 (polA)
03410 Base excision repair
NMQ04_11930 (polA)
03420 Nucleotide excision repair
NMQ04_11930 (polA)
03440 Homologous recombination
NMQ04_11930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgor03032
]
NMQ04_11930 (polA)
03400 DNA repair and recombination proteins [BR:
rgor03400
]
NMQ04_11930 (polA)
Enzymes [BR:
rgor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMQ04_11930 (polA)
DNA replication proteins [BR:
rgor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMQ04_11930 (polA)
DNA repair and recombination proteins [BR:
rgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NMQ04_11930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMQ04_11930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
LAMTOR
Motif
Other DBs
NCBI-ProteinID:
UTT47006
LinkDB
All DBs
Position
complement(2573417..2576140)
Genome browser
AA seq
907 aa
AA seq
DB search
MTRASTSATSIAATDDRPTLLLLDGHSLAFRAFYALPAENFKTHSGQTTNAVYGFTSMLI
NLLRDEQPTHVAAAFDVSRKTFRAELFAAYKAQRSAAPDDFKGQIDLTKDVLGAMGIPVM
AIEGYEADDIIATLATQAHARGFKVLVVTGDRDALQLVNGEITVLYPRRGVSDLTRFTPE
AVEEKYGLTPEQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLSGLVDRVDEVRG
KTGDALRENLSNVLLNRQLTEMVRDVAVPYTPEQLALAPWDRDRIHRLFDDLEFKVLRDR
LFETLSSAEPEAEEGFEVRGGIVEPGALGDWLTEHAPAGRRHGLAVVGTGTPYGGDATAI
AVAGADGEGAYVSTVALTPEDENALAAWLANPAVEKAVHEAKPAIHALRGRGWSLAGITS
DTALAAYLVRPGQRSFKLDDLSLRYLKRELRVEDTGAQQLSLLDDEDAADAQAAETQILA
ARAVVDLAASLDTELGDIESVRLLTEMELPLLEVLADLEATGIAVDATHLHDLQSEFAAQ
VAAAANAAYEVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDADALQNLFDKTGH
PFLEHLLAHREHTKMKTTVDGLIKSVADDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRT
EAGRRIRDGFVVGDGFDVLLTADYSQIEMRIMAHLSADEGLIEAFRTGEDLHTFVASRAF
GLPLEEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTDEAREHMEAYFTRFGGVRDYL
YNVVEEARKVGYTSTLYGRRRYLPDLNSDNRQRREIAERAALNAPIQGTAADIIKVAMID
VQKALNEAGLRSRMLLQVHDELVLEVVESEREQVEALVRDKMDSVIELSVPLEVSVGYGR
SWDAAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtgcatccacttccgcgacgtccatcgcggccaccgacgaccgcccgaccctg
ctgctcctcgacggccattcgctcgcgttccgcgcgttctacgcgctgcccgccgagaac
ttcaagacccacagcgggcagaccacgaacgcggtctacgggttcacctccatgctcatc
aacctgctgcgcgacgaacagcccacgcacgtcgcggcggcattcgacgtcagccgcaag
accttccgcgccgaactgttcgctgcctacaaagctcagcgcagcgccgcgcccgacgac
ttcaagggccagatcgacctcaccaaggacgtcctcggggcgatggggatcccggtgatg
gcgatcgagggttacgaggccgacgacatcatcgccacgctcgccacacaggcgcatgcg
cgaggcttcaaggtgctcgtggtgacgggcgaccgcgacgcgctccagctcgtcaacggc
gagatcacggtgctgtacccgcggcgcggcgtctccgacctgacgcgcttcacccccgag
gcggtggaggagaagtacgggctcacccccgagcagtatcccgatttcgcggcgctgcgc
ggcgacccgagcgacaatctgcccggcatccccggtgtcggtgagaagaccgccgcgaag
tggatccgggagtacggaagcctgagcggactcgtcgaccgcgtcgacgaggtgcgcggg
aagaccggcgacgcgctgcgcgagaatctgtccaacgtgctgctcaaccgtcagctcacc
gagatggtgcgcgacgtggcggtgccctacacccccgagcagctcgcgctcgccccgtgg
gatcgcgaccggatccaccgcctgttcgacgatctcgagttcaaggtgctgcgcgaccgg
ctgttcgagacgctctcgtcggccgagcccgaggccgaggagggcttcgaggtacgcggc
gggatcgtcgagccgggtgccctcggggactggctgaccgaacatgctccggcgggccga
cggcacggcctcgccgtggtgggcaccggcaccccttacggcggcgacgcgaccgcgata
gccgtcgccggtgccgacggcgagggtgcctacgtgagcaccgtggcgctcaccccggag
gacgagaacgctctcgccgcgtggctcgcgaatcctgcggtggagaaggccgtgcacgag
gcgaagcccgccatccacgcgctgcgcggtcgtggctggtcgctcgccggcatcaccagc
gacacggcgctcgccgcctatctggtgcggcccgggcagcgctcgttcaagctcgacgac
ctgtcgctgcgctacctcaagcgtgagcttcgggtggaagacaccggggcgcaacaactc
tcgctgctcgacgacgaggacgcggccgacgcgcaggcggccgagacccagatcctcgcc
gcgcgcgccgtcgtcgacctcgccgcgtccctcgacaccgaactcggagacatcgagtcg
gtgcggctgctcaccgagatggaactgcccctgctcgaggtccttgcggacctcgaggcc
accggcatcgccgtcgacgcgacacacctgcacgacctgcagtccgagttcgcggcccag
gtggccgcggccgcgaacgccgcctacgaggtcatcggcaagcagatcaatctcggttcg
ccgaagcagctgcaggtggtgttgttcgacgagctcgagatgccgaagacgaagaagacc
aagaccggatacaccaccgacgccgacgcgctgcagaacctgttcgacaagacgggtcac
cctttcctcgaacatctgctcgcgcaccgtgagcacaccaagatgaagaccaccgtcgac
gggctgatcaaatccgtcgccgacgacggccgcatccacaccaccttcaaccagaccgtc
gcggcgacgggccggctctcgtcgaccgagccgaatctgcagaacatcccggtgcggacc
gaggccggtcgccggatccgcgacggcttcgtcgtgggcgacggcttcgacgtgctgctc
accgccgactacagccagatcgagatgcgcatcatggcgcacctgtcggccgacgaagga
ctcatcgaagccttccgcaccggcgaggacctgcacaccttcgtggcgtcgcgcgcgttc
gggctgccgctcgaggaggtcacaccggaactgcgtcgccgggtcaaggcgatgtcctac
ggcctcgcctacgggctcagcgcctacgggctggcgcagcagctgaagatctccaccgac
gaggcccgcgaacacatggaggcctatttcacccgcttcggcggcgtgcgcgactacctc
tacaacgtggtcgaggaggcccgcaaggtcggctacacgtccacgttgtacggccgccgg
cggtaccttcccgacctcaacagcgacaacaggcagcgccgggagatcgccgaacgcgcc
gcgctcaacgcccccatccagggcacggccgccgacatcatcaaggtcgcgatgatcgac
gtgcagaaggcgctgaacgaggcggggttgcgatcgcggatgctgctgcaggtgcacgac
gagctcgtgctcgaggtggtcgaatccgaacgcgagcaggtcgaggcgctcgtgcgcgac
aagatggactcggtgatcgagctgtcggtgccgctcgaggtctcggtcggctacggccgc
agctgggacgccgccgcacactga
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