Rhodococcus gordoniae: NMQ04_12645
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Entry
NMQ04_12645 CDS
T08682
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00470
D-Amino acid metabolism
rgor00550
Peptidoglycan biosynthesis
rgor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NMQ04_12645 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NMQ04_12645 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgor01011
]
NMQ04_12645 (murD)
Enzymes [BR:
rgor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NMQ04_12645 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rgor01011
]
Precursor biosynthesis
Amino acid ligase
NMQ04_12645 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
TrkA_N
NAD_binding_7
Shikimate_DH
XdhC_C
ADH_zinc_N
Pyr_redox
Sacchrp_dh_NADP
AdoHcyase_NAD
ThiF
Motif
Other DBs
NCBI-ProteinID:
UTT47140
LinkDB
All DBs
Position
complement(2728753..2730243)
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AA seq
496 aa
AA seq
DB search
MTDELERLRGRSVLVAGAGVSGRATIEPLTDLGAHVTVTDRDERALAECAALGARTVDLD
TLVDDSAALREFALVVTSPGFPPDAPLLSRAAGAAVPIWGDIELSWRIDRAEIYGPARRW
LVVTGTNGKTTTTTMVHAILEAAGRSSVACGNIGLPVLDALRRDDPRADVLAVELSSFQL
HWAPSVRPDAGVVLNIAEDHLDWHGGIENYIEAKLGALTGAVGVLGLDDPIAGGLLDRSR
AVVTVGFTLGYPQEGELGISGELLVDRAFADSAVLARVDDVTPPGPAGLSDALAAAALAR
AIDVPESAVHDGLRRHRVGPHRAAPVGQVDGVDYIDDSKATNPHAARSSLLARDRVVWIA
GGLLKGARVDDLVAEVAPRLSGAVLLGRDAGDIAEALTRHAPQVPVVVVDTSDDEAMTDA
TSETDTPPVTRIAAPGADGPTAMRVAVREAAALASAGETVLLAPAAASLDMFADYAERGR
SFASAVEELRGGGTHR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaactcgaacggctcagagggcggtcggtgctcgtcgccggcgcaggagtg
tccggccgcgcgacgatcgaaccgctcaccgacctcggtgcccacgtcaccgtcaccgac
cgcgacgagcgggcactggcggagtgcgcggccctcggcgcgcggacggtcgacctcgac
acgctcgtcgacgactccgctgcgctgcgcgaattcgccctggtcgtcacgagtcccgga
tttccgcccgacgcgccgttgctgtcgcgggcggccggggccgcggtgcccatctggggc
gacatcgaactgtcctggcgcatcgaccgcgccgagatctacggaccggcccggcggtgg
ctggtggtcaccgggacgaacggcaagaccaccaccaccacgatggtgcacgcgattctc
gaggccgcaggtcgcagcagtgtcgcgtgcggcaacatcggtctccccgtgctcgacgcc
ctgcgccgcgacgacccgcgcgccgacgtcctcgccgtggagttgtcgtccttccagctg
cactgggcgccgtcggtgcgacccgacgccggtgtcgtgctcaacatcgccgaggaccat
ctcgactggcacggcgggatcgagaactacatcgaggccaaactcggggctctcaccggt
gccgtcggggtcctcggcctcgacgatccgatcgccggcggtctcctggatcgttcccgg
gctgtggtcaccgtgggtttcacgctggggtacccccaggagggcgaactcggcatcagc
ggagaactgctggtcgaccgggcgttcgcggattccgccgtgctggcccgagtcgacgac
gtgacgccccccggccctgccggactgtccgatgccctcgcggccgccgccctcgcacgg
gcgatcgacgtgcccgagtcggcggtacacgacggtctgcgacggcaccgcgtggggccg
caccgcgccgcgccggtcgggcaggtcgacggtgtcgactacatcgacgattcgaaggcg
accaacccgcatgcggcccgcagttcgctcctcgcgcgcgaccgcgtggtgtggatcgcc
ggtggtctgctcaagggtgcccgcgtggacgacctggtcgccgaggtggcgccgcggctg
tccggagccgtgctgctcggccgcgatgccggcgacatcgccgaggcgctgacgcgacac
gccccgcaggtcccggtcgtcgtggtggacacgagcgacgatgaagcgatgaccgatgcg
acgagcgagaccgacacgcctccggtgacgaggatcgcggcgccgggcgccgacggaccc
accgcgatgcgcgtggcggtccgggaagcggccgctctcgcctcggcgggagagacggtg
ctgctcgcgccggctgcggcgtcgctcgacatgttcgccgattacgcggaacgcggccgg
agcttcgcgtccgcagtcgaggaactccgcgggggcgggacgcacaggtga
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