Rhodococcus gordoniae: NMQ04_13485
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Entry
NMQ04_13485 CDS
T08682
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00470
D-Amino acid metabolism
rgor00550
Peptidoglycan biosynthesis
rgor01100
Metabolic pathways
rgor01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NMQ04_13485
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NMQ04_13485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NMQ04_13485
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgor01011
]
NMQ04_13485
Enzymes [BR:
rgor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NMQ04_13485
Peptidoglycan biosynthesis and degradation proteins [BR:
rgor01011
]
Precursor biosynthesis
Amino acid ligase
NMQ04_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
UTT47291
LinkDB
All DBs
Position
complement(2902212..2903318)
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AA seq
368 aa
AA seq
DB search
MSTPRTRVAVVFGGRSNEHSVSCISAGSILRHLDPEKYEVVPIGITPEGAWVLGDADPAR
LAAAGRELPVVAGDGSDLVLTADPTRGGDIVALDEGSYGRVLASVDVVFPVLHGAYGEDG
TIQGLLELANIPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGFQIVMRPGTAILTEEQKA
RLGLPVFVKPARGGSSIGISRVADWAAFDAAVAKAREHDPKVIVESAIIGREVECGVLEF
PDGDVRASVVAEIRMPDTSGDHEAFYDFDTKYLDDVCEFDVPAKLDEETSDRIRELAVRA
FRALDCHGLSRVDFFVTEDGPVINEINTMPGFTSISMYPRMWEATGVEYAELLSILVETA
LVRGTGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgccccgcacccgggtggccgtcgtcttcggtggtcgcagcaacgaacattcc
gtgtcctgcatctcggcaggcagcatcctgcgccatctcgacccggagaagtacgaggtc
gtgcccatcggcatcactcccgagggtgcctgggttctcggtgacgccgaccccgctcgc
ctcgccgcggccggtcgcgagctgcccgtcgtcgccggtgacggctccgatctcgtcctc
accgcggatcccacccgcgggggcgacatcgtcgccctcgacgagggttcctacggccgg
gtgctcgcatcggtcgacgtggtgttcccggtcctgcacggcgcctacggcgaggacggc
accatccagggactcctcgaactggcgaacatcccgtacgtgggtcccggtgtcctcgcc
agcgccgccggtatggacaaggagttcaccaagaagctgctcgcggccgaagggctcccc
gtcggtttccagatcgtcatgcgccccggcaccgcgatcctcaccgaggagcagaaggcc
cgtctgggcctgcccgtcttcgtcaagcccgcccgcggcgggtcgtcgatcggtatcagc
cgcgtggccgactgggcggccttcgacgccgcggtcgccaaggcccgagagcacgacccg
aaggtcatcgtcgagtccgcgatcatcgggcgtgaggtcgagtgcggcgtgctcgaattc
ccggacggtgacgtgcgggcgagcgtggtggcggagatccgcatgcccgacacctccggc
gaccacgaggcgttctacgacttcgacacgaagtatctcgacgacgtctgcgaattcgac
gtgccggcgaagctcgacgaggagacctccgaccggatccgcgaactcgcggtccgggcc
ttccgggccctcgactgccacggcctgtcccgcgtcgacttcttcgtcaccgaggacgga
ccggtgatcaacgagatcaacacgatgcccggtttcacgtcgatctcgatgtacccgcgg
atgtgggaggccaccggcgtggagtacgccgagctgctgtcgatcctggtggagacggcg
ctcgtgaggggcaccggcctgcgctag
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