Rhodococcus gordoniae: NMQ04_16475
Help
Entry
NMQ04_16475 CDS
T08682
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rgor
Rhodococcus gordoniae
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rgor03021
]
NMQ04_16475
Transcription machinery [BR:
rgor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NMQ04_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR
HTH_3
HTH_Crp_2
HTH_24
MarR_2
DUF7343
HTH_23
Sigma70_ECF
HTH_20
HTH_ParB
HTH_31
NirdL-like_HTH
LacI
IF2_N
KORA
HTH_IclR
HTH_Tnp_4
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UTT47823
LinkDB
All DBs
Position
3570129..3570911
Genome browser
AA seq
260 aa
AA seq
DB search
MTRNTGRSSDEYADVTETLRTLLALDEDDPGRIRIRDEVVARCLPLAEHIARRFDGRGEA
FEDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRRMKELH
LSLSKATSELSQQLGRAPTASELAEELGIEQEEVLQGLVAGNAYQTVSVDRSSPSGDDGL
TLADTLGDYDAALDEVENHEALRPLLEALPARERTVVLLRFFGNMTQTQIAERVGVSQMH
VSRLLTKTLAQLREQLGDNF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcaacacgggtaggtcgagcgacgaatacgccgacgtcaccgaaactctcaga
acactccttgcgctcgacgaggacgaccccggtcgtatccgcattcgcgacgaagtggtc
gcccggtgccttccgctcgccgagcacatcgcccgtcgtttcgacggccgcggtgaggcg
ttcgaagacctcttgcaggtcgcgcgtctgggcctggtcaacgcagtcgaccgcttcgac
cccgaacgaggttcggatttcgtctctttcgcggtccccacgatcatgggcgaggtgcgt
cggcactttcgtgatgccggctgggccgttcgtgtgcccaggcggatgaaggaactgcac
ctgtccctgagcaaggccacatccgagctctcccagcagctcggccgggcgcccaccgcc
tccgaactcgccgaggaactcggcatcgagcaggaggaggtgctgcagggtctcgtcgcc
ggcaacgcctatcagacggtgtcggtcgaccggtcgtccccgtccggcgacgacgggctc
accctcgccgacacgctgggcgactacgacgccgcactcgacgaggtcgagaaccacgag
gcgctgagaccactgctcgaggcccttcctgcaagggagcgcacggtcgtcctgctgcgc
ttcttcggcaacatgacgcagacgcagatcgccgagcgagtgggtgtctcgcagatgcac
gtgtcgcgtctgctcacgaagaccctcgcgcagctgcgcgagcaactcggcgacaacttc
tga
DBGET
integrated database retrieval system
