Rhizobium grahamii: FZ934_05090
Help
Entry
FZ934_05090 CDS
T06285
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgr03032
]
FZ934_05090 (topA)
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_05090 (topA)
Enzymes [BR:
rgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FZ934_05090 (topA)
DNA replication proteins [BR:
rgr03032
]
Prokaryotic type
DNA Topoisomerases
FZ934_05090 (topA)
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FZ934_05090 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
QFY59860
UniProt:
A0A5Q0C7B2
LinkDB
All DBs
Position
complement(1010905..1013559)
Genome browser
AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKTVKRVVFNAITKKAV
LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNLSALLKTPRGDEFEAKLVAANGKRLQARSIANGEEAGKLKALLDGA
SYVVDTVEAKPVKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGFDIGGETVGL
ITYMRTDGVQMAPEAIDAARSAIVDQFGQRYLPEKARFYSTKAKNAQEAHEAIRPTDFNR
SPDRVRQYLDADQIKLYDLIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARENLAKQKINSSQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDREYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDQISAGELNWKQVLRDFWTDFFAQIEDTKELRVTNVLDALNEALAPLVFPKRE
DGGDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSEGGSEAEGVALNEPKNL
GTDPVTGEELTLRSGRFGPYIQRGDGKEAKRSSLPKGWKPEDIDYEKAMALISLPRDIGK
HPETGKMISSGIGRYGPFLLHDGGYANLESVEDVFSIGLNRAVTVIADKASKGPAGRGRT
AAAALKELGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGTDPQALTVEEALALIAAKAG
KAPASKSKAKPKAKATSAETKTKTAAKPKTTKAKAPAKTKKSEE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgcctgcgaaggcaaagacgatcaacaagtatctggga
tccggatacaaggtgctcgcctccttcggacacgtgcgcgatctgcctgccaaggacgga
tcggttttgcccgatcaggatttcgaaatgctttgggaggtcgatggggcctcggcaaag
cgcatgaaggacatcgccgacgcggttaagtcctctgacggcctgttcctcgcaaccgac
ccggatcgcgagggtgaggcgatttcctggcacgtgcttgacatgctgaacaagaagcgc
gtcctgaacggcaagacagtgaagcgtgtggtgttcaacgcgatcaccaagaaggccgtt
ctcgatgccatggccgatccgcgcgacatcgacgtgccgctggtcgacgcctatctggca
cgccgtgcgctcgactatcttgtcggcttcaacctgtcgccggtgctttggcgcaagctg
cccggcgcacgatccgccggacgtgtgcaatcggtggcgcttcgcctcgtctgcgaccgc
gaatccgagatcgagcgctttatatccgaagaatactggaatctctcggcgctgctgaag
acgccgcgcggcgacgaattcgaggcgaaactggttgcagccaatggcaagcggttgcag
gcccggtcgattgcgaatggcgaggaagccggcaagctgaaggcgcttctggacggtgcg
tcctacgtggtcgacacggtcgaggcaaagcccgtcaagcgcaacccgggaccacccttc
acaacctccacattgcagcaggccgcctcgtcgaagctcggcttctcggcatcgcgcacg
atgcaggtcgcacagaagctctatgaaggcttcgatatcggcggcgagaccgtcggtctc
attacctatatgcgtaccgacggtgtacagatggcgccggaagcgatcgatgccgcgcgt
agcgccatcgtcgatcagttcggccagcgctatctgccggagaaagcccgcttctactcc
accaaagcgaagaacgctcaggaagcccacgaagcaatccgcccgacggacttcaatcgt
tcgccggatcgcgtgcgccagtatctggatgccgatcagatcaagctctacgacctgatc
tggaagcgcggcatcgccagccagatggcctcggccgagatcgagcgcaccaccgcggag
atcaccgccgataacaagggcgagaaggctggcttgcgcgccgtcggctctgtcatccgc
ttcgacggcttcatcgccgcctataccgatcagaaggaagacggcgagcagagcgacgat
ggcgacgaggatggccgcctgccggagatcaatgcccgcgagaacctcgccaagcagaag
atcaattcgagccagcactttaccgagccgccgccgcgctattcagaagcttcgctcatc
aagaagatggaagagctcggcatcggccgtccgtcgacctatgccgccacgctcgccaca
ctgcgcgaccgcgaatacgtgacgatcgacaagcgcaagctcattccgcaggccaagggc
cggctggtgacggccttcctcgaaagcttcttcacgaagtatgtcgagtacgatttcacg
gccgacctcgaggagaagctcgaccagatttcagccggcgagctgaactggaagcaggtg
ctgcgcgatttctggacggacttcttcgcccagatcgaggacaccaaggaactgcgcgtc
acgaacgtgctggatgccctgaatgaggcgctggcgccgctcgtcttcccgaagcgggaa
gatgggggtgatccccgcatctgccaggtgtgcggcaccggcaatctgtccttgaagctc
ggaaaatacggcgccttcgtcggctgctcgaactatccggagtgcaactatacgcgccag
ctttcgtccgaaggcggttcggaagccgaaggcgttgcgctgaacgaaccgaagaacctc
ggtaccgatccggtgaccggcgaagagcttacgctgcgttcgggccgcttcggcccctac
atccagcgcggtgatggcaaggaagccaagcgttcctcgctgccgaagggctggaagcca
gaggacatcgactacgagaaggcgatggcgctgatttcgctgccacgcgatatcggcaag
catccggaaaccggcaagatgatttcttccggcatcggtcgctatggaccgttcctgctg
catgatggcggctacgccaaccttgaaagcgtcgaagacgtcttctcgatcggcctcaac
cgcgccgtgaccgtgattgccgacaaggcgagcaaaggccctgccggacgcggccggact
gctgcggcagcgttgaaggaactgggcgaccatccggatggcggcgcgatcaccgttcgc
gacggcaagtatggtccctacgtgaactggggcaaggtcaatgcgaccctgccgaagggc
accgatccgcaggccctgaccgtcgaggaagcgctggcgctcatcgccgccaaggcaggc
aaggcaccggcatcgaagagcaaggcaaagccgaaggcgaaagccacctcggctgaaacc
aagacgaagaccgccgccaagccgaagacgaccaaagccaaggcgccggcaaagacgaag
aagagcgaagagtga
DBGET
integrated database retrieval system
