Rhizobium grahamii: FZ934_06060
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Entry
FZ934_06060 CDS
T06285
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr00540
Lipopolysaccharide biosynthesis
rgr01100
Metabolic pathways
rgr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FZ934_06060 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rgr01005
]
FZ934_06060 (kdsA)
Enzymes [BR:
rgr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FZ934_06060 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rgr01005
]
Lipid A
FZ934_06060 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QFY60027
UniProt:
A0A5Q0C7T3
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All DBs
Position
1206969..1207811
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AA seq
280 aa
AA seq
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MSQTNSEVVVGEGAGHVSFSNAGKLSLIAGPCQMESRDHAFMIAGVLKELCDKLGIGLVY
KSSFDKANRTSLSAQRGIGLETALEVFADLKKEYGFPVLTDIHTEEQCAEVATVVDILQI
PAFLSRQTDLLVAAAKTGRTINVKKGQFLAPWDMKNVLAKLNDSGNPNILLCERGASFGY
NALVSDMRSLPIMAGLGAPVVFDATHSVQQPGGQGGSSGGQREFVETLARAAVAVGVAGV
FVETHEDPDNAPSDGPNMVYLKDMPRLLEKLLAFDAIAKG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacaaattccgaagtcgtggttggcgaaggcgccggccacgtctccttttcc
aacgcaggcaagctgtctctgatcgccgggccctgccagatggaaagccgcgaccatgcg
ttcatgatcgccggcgttctgaaggagctctgcgacaagctcggcattggcctcgtttac
aagtcttccttcgacaaggcgaaccggacgtcgctctcggcacagcgcggcatcggtctc
gagaccgcactcgaggtgttcgctgatctcaagaaggaatacggcttccctgtcttgacc
gacattcacaccgaggaacaatgcgccgaggtggccactgtcgtcgacatcctgcagatc
ccggccttcctcagccgtcaaaccgacctgctggtcgctgccgccaagaccggtcgcacc
atcaacgtcaagaagggccagttcctggctccctgggacatgaagaacgtgcttgccaag
ctcaacgacagcggcaacccgaacatcctgctttgcgagcgcggcgcctccttcggctat
aacgcactggtatcggatatgcgttcgctgccgatcatggcgggccttggcgctcccgtg
gtgttcgatgcgacgcattcggtgcagcagccgggcgggcagggtggttccagcggcggt
cagcgcgagttcgtcgagacactggcacgcgccgccgtggctgtcggcgtcgcgggtgtg
ttcgtcgagacgcacgaagatccagacaatgctccgtcggatggtccgaacatggtctat
ctcaaggatatgccgaggcttctcgaaaagctcctggcctttgacgccatcgcaaagggc
tga
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