Rhizobium grahamii: FZ934_09095
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Entry
FZ934_09095 CDS
T06285
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr03420
Nucleotide excision repair
rgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZ934_09095
03430 Mismatch repair
FZ934_09095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_09095
Enzymes [BR:
rgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ934_09095
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZ934_09095
MMR (mismatch excision repair)
Other MMR factors
FZ934_09095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFY60568
UniProt:
A0A5Q0C3T9
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All DBs
Position
1839707..1842193
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AA seq
828 aa
AA seq
DB search
MSNSFDDMPFFDEEPGEAPRKQQAPAAPARGVPVSGGLAARAMAARGGAQQRPDYLEGLN
PEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTNRAFPSQILAVTFTNKAAREMK
ERIAHLVGGAVEGMPWLGTFHSIGVKLLRRHAELVNLRSDFTILDTDDVVRLVKQLIQAE
GLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGKGRELYFAYQQRLSTLNACD
FGDLLMHPIAIFRKTPDLLKEYHQRFRYILVDEYQDTNTAQYMWLRLLAQRPKGEPQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTAHILGAAAHLITHNEGRL
GKTLFTDRRDPDDIKVQLHNSWDSEEEARAIGDEIEQLQRNQHKLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQPADDLAFERIINTPKRGLGDTT
VRALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQERLENTSHTELAE
QILEESGYTDMWKADKTADAPARLDNLKELIRSMESFESMRGFLEHVSLVMDAEQNENLD
AVSIMTLHSAKGLEFETVFLPGWEEGLFPHQRSLDETGRAGLEEERRLAYVGLTRAKRRC
HLWFVNNRRIHGLWQSTIPSRFLEELPDTHVDVAAVEQSYGGYGRGGGYGQSRFDKAEPF
ANSHSTPGWKRAQQNRNDATRDNWGSRSGHSVERIGYGEAGPKSRTIDGELVAKSTTTEP
SKFKTGDRVFHMKFGNGNIKMIEGNKLTIEFDRAGEKRVLDGFVEPVS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtttcgacgatatgcccttcttcgacgaggagccgggcgaagcgccgcgc
aagcagcaagcccccgccgctcccgcacgcggagtccccgtttcgggaggtctagccgcc
cgcgccatggctgcccgtggcggtgctcaacagcggccggattatcttgaaggcctcaat
cccgagcagaccgaagccgtcgaaacactcgaagggccggtcctcgtgctggccggtgcc
ggcaccggcaagacgcgcgtgctgacgacgcgcatcgcccacatcctcaacaccaaccgc
gccttcccctcgcagatcctggccgtgaccttcaccaacaaggctgcccgcgagatgaag
gagcgtatcgcgcatctggtcggcggcgcggtcgagggcatgccctggctcggcaccttc
cactcgatcggcgtcaagctgctccgtcgccacgccgaactggtcaacctgcgctccgat
tttaccattctcgacaccgacgacgtcgtgcgcctcgtcaagcagctgatccaggccgag
ggcctcgacgacaagcgctggcccgccaagcagttcgccggcatgatcgacacgtggaag
aacaagggcctaggccccgccgacattcccgaaggcgacgcccgcgccttcgccaacggc
aagggccgcgaactctatttcgcctaccagcagcgcctctcgacgctgaacgcctgcgat
ttcggcgacctgctgatgcatccgatcgcgatcttcaggaagacgcctgatctgctcaag
gaataccatcagcgctttcgctatatcttggtcgacgaataccaggacaccaacaccgcg
cagtacatgtggctgcggttgctggcgcagcgcccgaagggcgaaccacagaatgtctgc
tgcgtcggcgacgacgaccagtcgatctatggctggcgtggcgccgaagtcgacaacatc
ttgcgcttcgagaaggacttccccggcgccaaggtgatcaagctcgagcgcaactaccgt
tcgacggcgcacattctcggcgcggccgcgcatctgatcacccacaacgaaggccgcctt
ggcaagacgctgttcacagaccgccgcgatcccgacgatatcaaggtgcagttgcacaac
tcctgggactccgaagaggaagcccgcgccatcggcgacgagatcgagcagctgcagcgc
aaccagcacaagctgaacgatatggccatcctcgtgcgcgcctccttccagatgcgcgag
ttcgaagaccgcttcgtgacgctcggcctcaactaccgcgtcatcggcggcccacgcttc
tacgagcgcctcgaaatccgcgatgccatggcctatttccgcctcgtcgcccagccggca
gacgacctcgccttcgagcgcatcatcaacacgccaaaacgtggcctcggcgatacgacg
gtgcgcgccctgcacgactatgcccgcgcccgcgacatcccgatgttggcggcggccgcc
gacatcatagagaccgacgagctgaagccgaaggcccgcaaagcgctgttcgacgtgatt
caatctttccgcagatggcaggaaaggcttgaaaacacatcacataccgagctcgccgag
cagatcctcgaagagtccggctataccgacatgtggaaggccgacaagaccgccgacgct
cccgcccgcctcgacaacctgaaggaactcatccgctcgatggagagcttcgaatcgatg
cgcggcttcctcgagcacgtctcgctggtcatggacgccgagcagaacgagaacctcgac
gccgtctcgatcatgacgctgcactcggccaagggcctcgaattcgagaccgttttcctg
ccaggctgggaagaaggcctcttcccccaccagcgctcgctcgacgagaccggccgcgcc
ggcctcgaggaagagcgtcgcctcgcctatgtggggctgacccgcgccaagcgccgctgc
cacctctggttcgtcaacaaccgccgcatccatggcctctggcaatcgaccatcccctca
cgcttccttgaggaactgcccgacacgcacgtagacgtggcggcggtcgagcagagctac
ggcggctatggccgcggtggtggctatggccagtcgcgcttcgacaaggccgagcccttc
gccaacagccactccacccccggctggaagcgcgcccagcaaaaccgcaacgacgccacc
cgcgacaactggggctcccgctccggccattcggtcgagcgcatcggctacggcgaggca
ggccccaagagccgcacgatcgacggcgaactggtggcaaaatccaccacgaccgagccg
tcgaaattcaagaccggcgaccgcgtcttccacatgaagttcggcaacggcaacatcaag
atgatcgaaggcaacaagctgacgatcgagttcgaccgtgctggcgaaaagcgggtgctg
gacggtttcgtggagccggtttcgtaa
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