Rhizobium grahamii: FZ934_09640
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Entry
FZ934_09640 CDS
T06285
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FZ934_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_09640
Enzymes [BR:
rgr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
FZ934_09640
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FZ934_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QFY60664
UniProt:
A0A5Q0C8J2
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All DBs
Position
complement(1961000..1961539)
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AA seq
179 aa
AA seq
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MTVDLDIGAALPRNGGRSDVLAIGLQVVFCGLNPATTAERDGHNFSSPTNRFWRVLHLAG
FTPRLLRAEEEQELLFYGCGITAAVERATRSAAELIADDYVKAAPVLEAKIRNFSPNNLA
FLGKAAFAAISGRGDCDWGPQSEVFAGARTWVLPNPSGLNRAFDLDRLTRHYRDLRSKL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgatctcgatatcggtgcggccttgcctcggaacggggggcggtccgacgtt
ctggcgatcggtctgcaggttgtcttctgcggactcaatccggcgaccaccgccgagcgg
gacggccataatttttcgtcaccgacgaaccgattttggcgagtactgcatctggccggg
ttcacgcctcggctgttgagggctgaggaggaacaggaactgcttttctatggctgcgga
ataaccgcggccgtggagagagcgacgaggagcgcagccgaactgattgccgacgactat
gtgaaagcggcgcccgtactagaggcgaagataaggaatttctcgccgaacaatctcgcg
ttcttgggaaaggcggcgtttgcggcaatcagcggccgcggtgattgcgattgggggccg
cagagtgaagttttcgcgggagcgaggacatgggtacttccgaacccaagcggcctcaac
agggcgtttgatttggatcgcttgacccgtcactaccgcgacctaagatcgaaactctag
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