Rhizobium grahamii: FZ934_09785
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Entry
FZ934_09785 CDS
T06285
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rgr
Rhizobium grahamii
Pathway
rgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FZ934_09785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_09785
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FZ934_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QFY60688
UniProt:
A0A5Q0C454
LinkDB
All DBs
Position
1995710..1996519
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AA seq
269 aa
AA seq
DB search
MARQTYWKGYLKLSLVTAAVSLTPATTDSNQLRFHVLNRKTKNRVESRYVDNVTHKPVSD
KDQVKGYPRSEDDYVILEDEELDGVALESTRTIDIDTFVPRGSIDWIWYDKPHFLAPEDK
VGVEAFCVIREAMRASNVVGIARLVLYRRERAVLLEPQGKGIVLWTLHFGDEVRAPAAAL
EIDSKMDATVLSLMTKLVKDRTEEWKTTMVQDPVQKRLKAMIRAKQKSMAKAAPISTKRP
ATKPTGNVVNIMDALKKSLTKENQRPKPH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcagacatactggaagggctatctcaagctctcgctggtcaccgcagctgtg
tctctgacccccgccacgacggacagcaaccagctacgcttccacgtcctcaaccgaaaa
acaaaaaatcgcgtcgaaagccgctacgtcgacaacgtgacgcataaaccggtctccgat
aaggaccaggtcaagggatatccgcgcagcgaggacgactacgtcatccttgaagacgaa
gaattggacggtgtcgcactcgaaagcacgcgcaccatcgatatcgataccttcgtgccg
cgcggctctatcgattggatctggtacgacaagccgcattttctcgcgcccgaagacaag
gtcggcgtcgaagccttctgcgtcatccgcgaggccatgcgcgccagcaacgtcgtcggt
atcgcgcgcctggttctttaccggcgcgagcgtgccgttctgctcgaaccgcaaggcaag
ggcatcgtgctctggacgctgcatttcggtgacgaggtgcgtgcccccgcggccgcgctg
gagatcgatagcaagatggacgccaccgtgctgtcgctcatgaccaagctcgtgaaggac
cggaccgaagagtggaagacgacgatggtgcaggacccggtccagaagcgcctgaaggcc
atgatccgcgcgaagcagaaaagcatggcaaaggcagcgccgatctcgaccaagcgtcca
gccaccaaaccgacaggcaatgtggtgaacatcatggacgccttgaagaagagccttacc
aaggaaaaccagcgtccgaagccacactga
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