Rhizobium grahamii: FZ934_15115
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Entry
FZ934_15115 CDS
T06285
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr00020
Citrate cycle (TCA cycle)
rgr00640
Propanoate metabolism
rgr00660
C5-Branched dibasic acid metabolism
rgr00720
Other carbon fixation pathways
rgr01100
Metabolic pathways
rgr01110
Biosynthesis of secondary metabolites
rgr01120
Microbial metabolism in diverse environments
rgr01200
Carbon metabolism
Module
rgr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rgr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FZ934_15115 (sucD)
00640 Propanoate metabolism
FZ934_15115 (sucD)
00660 C5-Branched dibasic acid metabolism
FZ934_15115 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FZ934_15115 (sucD)
Enzymes [BR:
rgr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FZ934_15115 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QFY61615
UniProt:
A0A5Q0C8J4
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All DBs
Position
complement(3112108..3113010)
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AA seq
300 aa
AA seq
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MSILVNKNTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF
ASVAEAKERTGADASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKAKLDK
SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADEATTSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKISAMEAAGIKVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctattctcgtaaacaagaataccaaggttctcgttcagggcctgaccggcaagacc
ggcaccttccacaccgaacaggcgctggcttactacggcacgcagatggtcggcggtatc
catccgaagaaggggggtgaaacctggaccggctcgaagggcgaatccctgccgatcttc
gcttcggttgccgaagccaaggaacgcaccggtgccgacgcttcggtcatctacgttccg
ccggcaggtgctgccgatgcgatcatcgaggcgatcgacgccgagatcccgttcatcacc
tgcatcaccgagggtatcccggtcatggacatggtgcgggtcaaggccaagctcgacaag
tcgaagtcgcgcctgctcggaccgaactgcccgggtatcctgacgccggaagaatgcaag
atcggtatcatgccgggctcgatcttccgcaagggttcggtcggtatcgtctcgcgctcc
ggcacgctgacctacgaagctgtgttccagacgtcgaacgaaggcctcggccagacgacg
gctgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtgctcgagatg
ttcctggccgacgaagccacgacctcgatcatcatgatcggcgaaatcggcggctcggct
gaagaagacgcagcccagttcctgatcgacgaagccaagaagggccgcaagaagccgatg
gcaggcttcattgccggccggaccgctccgaagggccgcaccatgggccacgccggtgca
gtcgtttccggcggcaagggcgatgcggaatccaagatctctgccatggaagcggccggc
atcaaggtttcgccttcaccggcacgcctcggcaagacgctggttgaagtcctcaagggc
taa
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