Rhizobium grahamii: FZ934_15350
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Entry
FZ934_15350 CDS
T06285
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgr03016
]
FZ934_15350 (thpR)
Enzymes [BR:
rgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FZ934_15350 (thpR)
Transfer RNA biogenesis [BR:
rgr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FZ934_15350 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QFY61656
UniProt:
A0A5Q0C6U4
LinkDB
All DBs
Position
complement(3157342..3157935)
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEVVDRLDR
IDRPEFQIRLDGIGSFGSKKPHSVWAGVSPSPEMYALQAEIERICQRIGLPPDPRKFMPH
VTLARMKNARVDDVVHYLAGRGNFQTTQFTVPRFVLLSSRDSVGGGPYLTEEIFPLHEAL
SAPSAASSFLQPVKSLA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactatttaccgccctcgaaattccgcgcaatgcggcgatgagcctctctttg
ctgcgcggtggtctccctggtgctcgctggatcgacgtcgagaactatcacatcacgtta
cgcttcatcggcgatgtcgatggccggaccgctgacgaggtagtagaccgtctcgatcgc
atcgatcgccccgagtttcaaattcggctggatgggatcggatcattcggttcgaagaaa
ccgcattcggtgtgggcaggggtttcgccttccccggaaatgtacgccctgcaggccgaa
atcgaacgcatttgccaacggatcgggctgccgccggatccacgcaagttcatgccgcac
gtcacattggcgcgaatgaagaacgcacgggtcgatgacgtcgtccactatctcgcgggt
cgcgggaatttccagacgacgcagttcaccgtgccgcgtttcgtgcttctctcctcacgg
gattccgtcggtggcgggccatatctgacggaagagatctttcctcttcacgaggcgttg
tcggcgccgagcgctgccagcagcttcctgcagccggtcaagagcctggcatag
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