Rhizobium grahamii: FZ934_16500
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Entry
FZ934_16500 CDS
T06285
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_16500 (addA)
Enzymes [BR:
rgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ934_16500 (addA)
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FZ934_16500 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
Astro_VPg
Motif
Other DBs
NCBI-ProteinID:
QFY61857
UniProt:
A0A5Q0CD52
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All DBs
Position
complement(3407345..3410896)
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AA seq
1183 aa
AA seq
DB search
MNDETTLPEGDDPIAWTSWTTIQQSVASDPERSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFDRLADWAVLSDDDLSQRIGQIEGKRPDRLKLAEARRL
FARALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAVTLLADARRSLLTAT
TPEDDATLAEAFTYVLNLGDESGLENLLSEIVANRNAIRRFTLAAERAGGLDLVLRDRLG
LLPDETEAAIVASYWPLPVLSGPVLDRYLDLADEKGGVKAQDVAANLRAAGRERDAKRRI
ALLEKTFLTVKGEAKADSQFFVKAMLSEAPALADAIAAARSHILSRRDRLKIIRMHDATR
AALILADRLNRDYEDLKKQRSQLDFEDLITRTADLLNKSDVGPWIHYKLDQGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGEGARSVVRTLFAVGDEKQSIYSFQGARPERFSEESRRT
RHRVAQSGLAFSTVRLPLSFRSTADVLAAVDHIFTPEGNARGLSASSEPVVHRSNRIGHP
GAVDLWEMIAPEVTVKEEDWTAPFDATPESAPAAVLARRMAHTIGNLVGKETIIEKGKER
LIEAGDILVLVRKRDSFVNALTRALKRRDNIPVAGADRLRLTSHIAIQDLVALGRFLLLP
QDDLSLAALMKSPLLDLSEDDIFAVAALRPDDESVWTHLLKFADDGNERLQVAVRKLKLF
LNESKSLSVHDFYAHVLGSNGGRRQFLARLGTEVSDILDEFLTFALDHENSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHSHMPKLRLLEQ
PGDEPPMPAWVPLGDLSNSLTQADASRIQLLAEEEYRRLLYVAMTRAADRLIVCGYRGVR
PNSDTWHAMISAAMTDSHPHVAAATFSGPDGTWSGIKWRVPHIGRNFERAAPPELAQTNE
RLPENLSRPLPPQRQLPRPLSPSGAGTVIDEQADDLLVTSPLFGDKAKSDRSLLKGRLLH
RMLQTLPDFSPTDRLAAAQRYLERSARRWSQDERETLIRSVLRLLEAPTLQGVFTGHAQP
EVSIMGTLSLKGRDYAVSGRVDRMAVFDDRVVVLDYKTNRVPPQTAEAIPFAHKAQLAIY
REILAPLYPGKRIDCVLVYTENGSVHTLPPDALASALAQLETK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgaaacgacgctgccggagggcgatgatcctatcgcatggacaagctggaca
acaatccagcagtcggttgcctcggacccagagcgttctgcatgggtttcggccaacgcc
ggatccggcaagacgcacgtcctgacgcaacgggtcattcgcttgctgcttgccggcgcg
cgcccctcggcaattctctgcctgacttataccaaggctgcggcctccgaaatgtccaac
cgcgtgtttgaccgactggctgattgggccgtcctgtcagacgacgatctgagccagcgg
atcggccagatcgagggcaagcggcctgatcgcctgaagctcgccgaagcgcgtcggctg
tttgcaagggcgctcgaaacgccgggcggattgaaaatccagacaatccacgccttctgt
gaagccctgctgcaccagtttccgctggaagctaacgtcgcgggtcatttttcggttctc
gacgaccgcgctgccgtcactctgcttgccgatgcgcggcgttcgctcctgacggcgacg
acgcctgaagatgatgccacgttggccgaagccttcacctatgttctcaatctcggcgac
gaaagcggcctggaaaacctgctgagtgagatcgttgcaaaccgcaacgcgatccgcaga
ttcacgctcgcagcggagcgcgccggcggccttgatcttgttcttcgcgacaggttggga
cttcttcctgatgagacagaagcagcaatcgtcgccagctattggccgttgccagtacta
tcgggccccgtgctcgaccgctatctcgatctcgcggatgagaaaggtggcgtcaaggct
caagacgttgccgcgaacctccgggctgcgggcagagaacgagacgcgaaacgccgcatc
gcgcttctcgaaaagacgttcctgaccgtcaagggcgaggcgaaggcggattcgcagttc
ttcgtaaaggcgatgctgagcgaagcgccggcactggcagatgccattgcggcggcacga
tcgcacattctctctcgccgcgaccgactgaagatcatccggatgcatgatgcgacgcgg
gcagcgttgatcctggctgatcgcctcaatcgcgactacgaggacctcaagaagcagcga
agccagctcgacttcgaggacctgatcacgcgcacggcggatctgctcaacaagagcgat
gtcgggccctggatccactacaagctcgaccagggcatcgatcatattcttgtcgacgaa
gcgcaggacaccagcccgatccaatggagtgtcattcagtcgctggccgaagatttcttt
tcgggagagggtgcccgaagtgttgtgcgcacgctgtttgcggttggcgacgagaagcag
tcgatctactcgtttcaaggtgcacggcccgagcggttctccgaagagagccgtcggacc
cgtcaccgcgtagcccaaagcgggcttgccttttcgacggttcgcctgccgctatccttc
cgctccaccgccgatgttctggcagccgtcgaccacatctttacacccgagggtaacgcc
cgcgggctgagcgcttccagcgagcccgtcgttcaccgttccaaccgtatcggtcatccc
ggcgccgtcgatctttgggagatgatcgctcctgaagtgaccgtcaaggaagaggactgg
accgcgcccttcgacgcgacgcccgaaagcgcgccagcagccgttcttgctcgcaggatg
gcgcacacgatcggcaatctggtcggcaaggaaaccatcattgagaagggtaaggagcgc
ctgatcgaagccggagacatcctcgtcctggtgcggaaacgcgattccttcgtcaatgcg
ttgacccgtgccttgaagcgtcgtgacaacattccggttgcgggcgccgaccgcttgagg
ctgacaagccacatcgccattcaggacctcgtcgccctcggccggttcctgcttctgccg
caggacgacctgtcgctggcggcactgatgaaaagccccctgctcgatctcagcgaagac
gacatctttgccgtggcggcgctccgtccggacgatgagagcgtttggacacatctgctg
aaatttgcggacgatggcaacgagcggctgcaggtcgcggttcgaaagctgaagctgttc
ctgaatgaatcgaaaagcctctctgtccatgacttctacgcccatgtgttggggagcaac
ggtggacgccgacaatttctcgctcgcctgggcaccgaggtcagcgatattctcgatgag
ttcctgaccttcgcgctcgaccacgagaattccggcctccctggcttacaatcgttcatt
tcgacgctcgaactggaggccccggaggtcaagcgcgagcaggacaaaggccgcaacgaa
gtgcggatcatgaccgtccacgcctcgaagggcctggaagcgccgatcgtcttcctcgtc
gacggtggctcgaaagcctttacgcatagccatatgccgaagctgcggctgctggagcag
ccgggcgacgagccgccgatgccggcatgggtgccgctcggggatctcagcaactcgctg
acacaggctgacgcgagccgcattcagttgctggccgaggaagagtatcgccggctgctt
tacgtggcgatgacgcgagccgccgaccggttgatcgtttgcggctaccgcggcgtgcgg
ccgaacagcgatacttggcatgcgatgatttcagcggcgatgactgatagccacccacac
gtcgcggcggcaacgttctccggtcccgacggcacctggtctggaatcaaatggcgcgtt
ccgcacatcggaaggaacttcgagcgggccgcaccacctgagctggcacaaacgaatgaa
agattgcccgaaaacctcagcagaccgctgccgccgcagagacagttgccgcgacctctc
agcccttccggcgcgggcacggtcattgatgagcaggcagacgacctgctcgtcacatcc
ccactattcggcgacaaagcaaaatccgaccgctccttgctaaagggccggctcctgcac
cgcatgctgcagacgctaccggacttttcaccgacagatcgcctggccgccgcgcaacgc
tatctggagcgttcggcccggcgctggtcgcaggacgagcgcgaaacgctgatccgatct
gtcttgcgactgctggaagcaccgacactgcaaggcgtattcaccggccacgcccaaccc
gaagtctcgatcatgggaacgctatccctgaaaggccgcgactacgcagtctctggccgc
gtcgatagaatggcggtcttcgacgatcgcgttgtcgtactcgactacaagaccaatcgc
gtcccgccgcagacagcggaagcaatcccctttgctcacaaggcgcagcttgccatttat
cgggagatcctggcgccgctctacccaggcaagcgcatcgattgcgtgctcgtctacacc
gaaaatggctccgttcacacgctaccgccggatgccctggcgtcggcgcttgcgcaactc
gagacaaagtga
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