Rhizobium grahamii: FZ934_16505
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Entry
FZ934_16505 CDS
T06285
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_16505 (addB)
Enzymes [BR:
rgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ934_16505 (addB)
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FZ934_16505 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QFY61858
UniProt:
A0A5Q0C7C9
LinkDB
All DBs
Position
complement(3410889..3414083)
Genome browser
AA seq
1064 aa
AA seq
DB search
MVEHHRPRLLTIPAGLPFLRTLAESLCDGRLTPRFRYDPGDPLSLSTVTIYLPTRRAARV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDESLPATLDLAQPLSNTSRLLELARLIL
AWRNKLPEIVRSIHSDSPLVAPASPADAIWLARNLAELIDSIETEDKEWSELSDLSANDH
ALWWQLTAEFLRIASAFWPERLNELGKSSPARHRNAILRAEASRIATMAESGPIIIAGST
GSVPATADLIAAVAGRPEGVIVLPGLDTAMPDRHWEMVAPEASFGRPVDAASRSHSQYGL
AQLLKRLGSTRDDVAPLAEPPADLDLRGRILSHSLSPSEATSEWGDFKHALNEGDISRAF
ADVSLIEAANEREEATAIAIALRLALEQPGTSGESRAALITPDRNLARRVATELSRFGII
ADDSAGTPLAATPQGTLLQLLLEATLRPGDPVALVGLLKHPLARFGLEPDLLAQSVAALE
LIALRGGVAEVDISTLEPLVEQQLADQALEQHVPKWRKALPTDAPDKARDLARRVSAAVE
PLASAFVHRRPDGRAMTTAFTLSDWAERTGRALEAVASDRRADLSGLWSDEAGDTLASLL
AEIIDTDGQIEADGPQWIDIMAALTAGQAVKPRALLHPRLLILGTLEARLQSVDTLILGG
LNEGSWPGQTSNNPFISRTMKTEIGLEPPERRIGQLAHDFEMANGTRHLVYSRALRQGST
PTVGSRWLQRLLAFGGKSLEAELKARGARFIHWANLIDQGDRQAPAQRPSPTPPREMQPK
SYSFSEVGRLRRDPYAIYARRVLRLDPVAPFNRDPGAAERGTLYHTIIDRFIREGHMAGT
DDAADAMERILNELFDMEQLPPHIDAVWRPRFREVAKAFLNWEAERRPDVRRTLTEVRGG
VELETVNIRLSGVADRIDIRGPGAADIIDYKTGFNPSPAQARALLDPQLALEAAALSAGA
FREAGSLTPQDLLYVRLRPGTRFQVDTVNNEFSGKGDKAKSAMDLAGDSIDQLIKFVSLL
QSGEKGFTSRLIPAQQFEFGGDYDHLARVSEWSTAESDEGGDDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagcatcaccgaccaagactcctgaccatacccgctggcctccccttcctgagg
acgcttgcagagagcctctgcgacggtcggcttacacctcgctttcgttatgatcccggc
gatccgctatcgctgtcgacggtcactatctatctgccaacgagacgcgcggcgcgcgtc
ctgcgttcggagttcgtcgatcttctcggcgggcgatcggcgatcctgcccgtgatccgc
ccgctcggcgaaacggacgatgacagtggctactttgacgaaagcctgcccgccacgctc
gatcttgcgcagcccctttcgaatacgtcgcggttgctcgaactggcgcggttgatcctc
gcctggcgaaacaaactgcctgagatcgtccgcagcatccattcggactcgccgcttgtc
gcacccgcaagccccgctgacgcgatctggctcgcaagaaaccttgcagagctgatcgac
tcgatcgaaacggaagacaaagagtggagtgagctttccgatctcagcgccaatgatcac
gcattgtggtggcagctgacggctgaattcctgcggatcgcgagtgccttctggccggag
cggctgaacgaactcggaaaatcttctcctgcccgacaccgcaacgcgatcctgcgggca
gaggcgagccggattgcaacgatggctgaatccggccccatcatcattgcaggctcgaca
ggctcggtgccggcaacggccgatctcatcgccgctgtcgcgggccggccggagggcgtg
atcgttctgccggggctcgacaccgccatgccggacaggcattgggaaatggtggctcca
gaggccagtttcggccgacctgtcgacgctgccagccgaagccattcgcaatacggtctg
gcgcagctgttgaagcggctgggatccacccgcgacgatgttgccccgcttgcagagccg
ccggcggacctcgacctacgcggtcgaatcctatctcattccctttcgccctccgaggcg
acaagcgagtggggtgatttcaagcatgccttgaacgagggtgacatctcgcgcgctttc
gcggatgtgtccctgatagaggcggcgaacgagcgcgaggaagcgacagcgatcgcgatc
gcgctgcgccttgcgctcgagcagccgggcacttccggcgagagcagagccgcgctgatt
acgccggacaggaacctggcccgccgtgtcgccaccgagctttcgcgcttcggaatcatc
gccgacgactcggccggtacgccgctggccgccacgccgcagggcaccttgctgcagctt
ctgctggaggcaacgctgagaccgggtgatccagtcgcactcgttggcctgctgaagcac
ccgttggctcgtttcgggcttgaaccggatctgcttgcgcagtccgtggccgccttggag
ctgatcgcccttcgcggcggtgtcgccgaagtcgacatcagtacacttgagccgttggtc
gagcagcaactggccgatcaagcgctggaacaacacgtgccgaaatggcgaaaggcgctg
ccgacagatgcgcccgacaaggcgcgcgatctcgcgcggcgtgtcagtgcggcagtcgag
ccgctcgcctccgcatttgtccatcgacgcccggacggtcgcgccatgaccacggccttt
acactgtcggactgggcggagcgcaccggtcgcgcactggaagcggttgcctccgatcgg
agggcagatctgtcggggctctggtccgacgaagctggcgatacacttgccagcctcctg
gctgaaatcatcgataccgacgggcaaatcgaagccgacggccctcagtggatcgatatc
atggccgcgctgacagctggccaggccgtcaagccacgtgccttgctccatccgcgcctt
ctcattctagggacgctggaagcacgcctgcagagcgtcgatacgctcatactcggcgga
ttgaacgagggctcctggccgggccagaccagcaacaatccgttcatctcgcgtacgatg
aagaccgaaatcggactggagccgccggaacgccgcatcgggcagctggcgcacgatttc
gaaatggcgaacggcacccgccatctggtctactcccgcgcgctgcgccagggatcaacg
ccaacggttggttcgcgctggctgcagcgcttgctggctttcggcggcaagtcattggaa
gcggagctgaaagcgcgtggtgcgcgtttcattcattgggcaaatctcattgatcaaggc
gatcggcaggctcccgcccagcggccaagcccgacgccgccaagagagatgcagccgaaa
tcctactccttcagtgaagtcggcaggctgcggcgcgacccctatgcgatttacgcaagg
cgcgtcctgcggctcgatccggttgcgcccttcaatcgcgatcctggtgcggctgagcga
ggaacgctctaccacacgatcatcgatcgcttcatccgggaaggccatatggccgggact
gatgatgcagccgacgcgatggagcgcatcctgaacgagctcttcgacatggagcagttg
ccgccgcatatcgatgccgtatggcggccacgtttccgcgaagttgccaaggcattcctg
aactgggaagctgaacggcggcccgatgttcgccgcacgctgacagaagttcgcggcggc
gtcgagctggagactgtcaatatccgcctcagcggtgttgccgacaggatcgacatcagg
ggccctggcgctgccgatatcatcgactacaagacggggttcaacccttctccggctcaa
gcccgtgcccttctcgacccgcagctcgcactcgaagccgctgcgcttagcgcaggtgcg
ttccgagaggcgggaagccttacgcctcaagacttgctctatgtgaggctccggccgggc
acccgttttcaggtcgacaccgtcaacaacgagttctcaggcaagggcgacaaggccaaa
tcggctatggatcttgccggcgattccattgatcagctcatcaagttcgtatctctgctg
caatcaggcgaaaagggatttacctcccgtctcatccccgcacagcagttcgagttcggc
ggtgattacgaccatctcgcgcgcgtatcggagtggtcgaccgccgaaagcgacgaagga
ggcgacgatgaatga
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