Rhizobium grahamii: FZ934_16890
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Entry
FZ934_16890 CDS
T06285
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgr03016
]
FZ934_16890 (truB)
Enzymes [BR:
rgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FZ934_16890 (truB)
Transfer RNA biogenesis [BR:
rgr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZ934_16890 (truB)
Prokaryotic type
FZ934_16890 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QFY61922
UniProt:
A0A5Q0C8Z5
LinkDB
All DBs
Position
3486577..3487509
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AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLFKAQKCGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERATDDLEGDVTHSSDIRPSEQQIRDLLPKYTGVI
SQVPPQFSAIKIAGERAYDLAREGEAVEIPSREVEIFRLTLLSCQDVNTAHFEVECGKGT
YVRALARDFGRELGCYGHISGLRRSFVAPFAEDTMIPLADLIALEAVEDADERLAALDAL
LIDTSEALSSLPHLVVNDDQAHRLKMGNPILVRGRDAPVAESEAYATSRGKLVAIGEIGQ
GEFRPKRVFG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgtaaaccgaagggccgcccgatttcgggttggctgatccttgataag
ccggtcgatttcggctccaccgaagccgtttccaagatcaagtggctgttcaaggcgcag
aagtgcggtcacgcgggaacgcttgatcccttggcttcgggcatgctgccgatcgcgctt
ggcgatgcgaccaagaccgttccctacgtgatggatggccgcaagatctacgaatttacc
gtgacgtggggtgaagagcgcgcaaccgacgatctcgaaggcgatgtaacgcatagctcc
gacatccgcccaagcgaacagcagatccgcgatctcctgccgaagtacactggcgtcatc
agccaggttccgccgcagttctccgccatcaagattgccggcgagcgcgcctacgatctg
gcgcgcgagggcgaagccgtcgagattccgtcccgcgaagtcgagattttccgtctgacg
ctcttgtcctgtcaggacgtcaataccgcgcacttcgaagtcgagtgcggcaagggcacc
tatgtacgggcactcgcgcgcgatttcggccgcgaactcggctgttatggccatatttcc
ggcctgcgtcgcagctttgtcgcgccgtttgccgaagacaccatgataccgctcgccgat
ctcattgccctcgaggcggtcgaagatgccgacgaacggctggcagctctggatgcgctg
ctgatcgacaccagcgaggcgctctcctcgctgccgcatctcgtcgtcaacgacgatcag
gcgcataggctcaagatgggcaatccgatcctcgtacgtggtcgcgatgcgccggttgcc
gaaagcgaggcctatgccacgtcgcgcggcaagctggtggcgatcggcgagatcgggcag
ggcgagttccgcccgaagcgcgtctttggctga
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