Rhizobium grahamii: FZ934_17685
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Entry
FZ934_17685 CDS
T06285
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr03030
DNA replication
rgr03410
Base excision repair
rgr03420
Nucleotide excision repair
rgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZ934_17685 (polA)
03410 Base excision repair
FZ934_17685 (polA)
03420 Nucleotide excision repair
FZ934_17685 (polA)
03440 Homologous recombination
FZ934_17685 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgr03032
]
FZ934_17685 (polA)
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_17685 (polA)
Enzymes [BR:
rgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZ934_17685 (polA)
DNA replication proteins [BR:
rgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FZ934_17685 (polA)
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FZ934_17685 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZ934_17685 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Transposase_20
HHH_2
HHH
IMS_HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QFY62066
UniProt:
A0A5Q0C7Y9
LinkDB
All DBs
Position
complement(3646928..3649924)
Genome browser
AA seq
998 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLTDARDTSVGVT
PTHLAVIFDYSSKTFRKDLYDAYKANRSAPPEELIPQFGLIRQATRAFNLPCIEVEGFEA
DDIIATYARQAEAIGGDVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLAEYGDLDTLLNRATEIKQEKRRQTIIENA
DKARLSRELVRLRTDVPLELAVQDLVLEKQDGPKLIGFLKAMQFTSLTRRVADACECDAS
VIDAVDVPVEWGAAAHGPDLDVDKPAPVAGGVPDIVGDSVQVPAKAKEANGEGMFQPASL
AQSRAEAFASLPFDHSRYITIRDLATLDQWIADARQTGLVAFDTETTSLDAMQAELVGFS
MAIADNAKNSTGTTIRAAYVPLTHKTGYGDLLGGGLADNQIPMRDALPRLKALLEDASVL
KVAQNLKYDYLLMKRYGVETRNFDDTMLISYVLDAGTGAHGMDPLSEKFLGHKPIAYKDV
AGSGKSNVTFDLVDIDRATHYAAEDADITLRLWMVLKPRLAAEKLTAVYERLERPLLPVL
AHMEERGITVDRQILSRLSGELAQGAAALEDEIFKLAGERFTIGSPKQLGDILFGKMGLA
GGTKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPQTKRVH
TSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFIAAPGHKLISADYSQIELRVLAH
VAHIPQLTQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLSNQ
LSIERSEASDYIKRYFERFPGIRDYMDSRKQMARDKGYVETIFGRRINYPEIRSSNPSVR
AFNERAAINAPIQGSAADIIRRAMIKMEPALSEAGIGDRVRMLLQVHDELIFEVEDADVE
KATPIIVSVMENAAMPALEMRVPLKVDARAASNWDEAH
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatcttttccttgtcgacggttccggcttcatctttcgggccttt
cacgctcttccgccactgactcgcaaatcggacggtctgcccgtcggcgccgtctcgggt
ttctgcaacatgctgtggaaattgctgacggatgcacgcgacacctcggttggagtcacg
ccgacgcatctggccgtcatcttcgattactcgtcgaagaccttccgcaaggatctttac
gacgcctacaaggccaaccgctcggcgccgccggaagagctcattccgcagttcggactg
atccggcaggcgacgcgggctttcaacctgccctgcatcgaggtcgaagggttcgaggct
gacgacatcatcgccacctatgcgcggcaggccgaggcaatcggcggcgacgtgacgatc
gtttcctccgacaaggacctgatgcagctcgtcacgcccaatgtccacatgtacgacagc
atgaaggacaagcagatcggcatccccgatgtcgtcgaaaagtggggtgtgccgccggag
aagatgatcgatcttcaggccatgaccggcgactccgtcgacaacgtgcccggcattccg
ggcatcggaccgaaaacggcggcccagttgctggccgaatatggcgacctcgatacgctg
cttaaccgggcaaccgagatcaagcaggagaagcgccggcagaccatcatcgaaaacgcc
gacaaggcaagactgtcacgcgagctcgttcgcctcaggaccgatgtgccgcttgagctg
gcggtccaggatctggtgctcgagaagcaggatgggccgaagctgatcggcttcttgaag
gccatgcagttcacgtcgctgacgcggcgcgtcgccgacgcctgcgaatgcgacgccagc
gtaatcgacgcggtggatgttccggttgaatggggtgctgcggctcatgggccggatctc
gacgttgataagccggcgccggttgccggcggcgttcccgatatcgtcggtgacagcgtt
caggttccggccaaggcgaaggaagcgaatggcgagggcatgttccagccggcatcgctg
gcacagagccgcgccgaggcgttcgcctcgctgccgttcgaccactcccgctacataacg
atccgcgatctcgccaccctcgaccaatggatcgcggatgcgcggcagacggggctagtt
gcgttcgacacggaaaccacctcgctcgacgcgatgcaggccgaacttgtcggcttctcg
atggcgatcgccgataacgccaagaattcgaccggcaccaccatccgcgcggcctatgtg
ccgctcacgcacaagacgggctacggtgatcttctcggcggcggccttgctgacaatcag
attccgatgcgcgatgcgctgccgcgcctgaaagcgctgctcgaagacgcgtccgtgctg
aaagtcgcgcagaacctgaaatacgactacctgctgatgaagcgctatggcgtcgagacc
aggaacttcgacgataccatgctgatctcctatgtgctcgatgccggaaccggcgcccac
gggatggatccgctgtcggaaaagttcctcggacacaagccgatcgcctacaaggacgtc
gccggcagcggcaagtcgaacgtgaccttcgacctcgtcgacatcgaccgggcgacgcac
tatgcggcagaggacgccgacatcacgcttcgcctctggatggtgctgaagccgcggctg
gccgccgaaaagctgacggccgtgtacgagcggctcgagcgcccgctgctgcctgtcctc
gcgcatatggaagaacgcggcattacggtggaccggcagatcctgtcgcgtctctccggc
gagcttgcacagggtgcggccgcgctcgaggacgagatcttcaagcttgccggcgagcgc
ttcaccatcggctcgccgaagcagctcggcgacatcctgttcggcaagatggggctcgcg
ggcggcaccaagacgaagaccgggcaatggtctacttcggccagcgttctcgaggatctg
gcggcggccggtttcgagctgccgcgcaagatcgtcgactggcgccagcttaccaagctg
aagtcgacctataccgacgccctgccgggatatgtccatccgcagacgaagcgagtgcac
acatcctattcgctggcatcgaccacgacgggccgcctttcctcatcggaacccaatctg
cagaacattccggtccgcaccgccgaaggtcgcaagatccgcacggccttcatcgccgcg
ccggggcacaagctcatttccgcagactacagccagatcgaattgcgcgtgctggcacat
gtcgcgcacattccgcagctgacacaggccttcgccgacggcatcgacattcatgcgatg
acggcctcggaaatgttcggcgtaccggtcgaaggcatgccttcggaagtgcgtcgccgc
gccaaggcgatcaacttcggcatcatctacggcatttcggccttcggcctctccaaccag
ctgtcgatcgaacgctcggaggcaagcgattacatcaagcggtacttcgagcgcttcccc
ggcattcgcgactacatggacagccgcaagcagatggcgcgcgacaagggctacgtcgag
acgatcttcgggcggcgaatcaactatccggagattcgctcctccaacccgtcggtccgt
gccttcaacgagcgcgctgccatcaatgcgccgatccagggttcggccgccgatatcatc
cgccgtgcgatgatcaagatggaaccggcactcagcgaagccggaattggcgaccgtgtg
cgcatgctgttgcaagtgcacgacgaattgattttcgaggtcgaggatgcggatgtcgag
aaggccacgccgatcatcgtttccgtgatggaaaacgctgcgatgcccgccttggaaatg
cgcgtgccgctgaaggtcgacgcgcgcgccgccagcaactgggacgaagcgcactga
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