Rhizobium grahamii: FZ934_17915
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Entry
FZ934_17915 CDS
T06285
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgr03016
]
FZ934_17915
Enzymes [BR:
rgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FZ934_17915
Transfer RNA biogenesis [BR:
rgr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FZ934_17915
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
DUF5564
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QFY62104
UniProt:
A0A5Q0CCC6
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All DBs
Position
complement(3693715..3694332)
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AA seq
205 aa
AA seq
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MHEQNTQSSFDFASRTMHPKSSRFGKETLFFAILPDPEARQRCMEIQQKLKRDHDALLSP
LPPERLHVSLYGVASAEKIKDDIIFAACRAASAIDACCFDLSFDHVATFKTAPRNAIVLS
GNGGRELLRQLHVRIGIEMHAIGCDPHVKIDFQPHATLFYADDVIARTGLDVPITLPVRE
FVLLHKRPGEQAYEHIARWPLQNRG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacagaacacgcaatcgtccttcgatttcgcaagccgtacgatgcacccgaaa
tcgtcaagatttggcaaagaaaccctgtttttcgcgatcctgccggatcccgaagccaga
cagcgctgcatggaaatccagcaaaaactgaagcgggaccacgacgctctcctctcgccc
ttaccgcccgagcggctgcatgtctcgctctatggcgtcgccagcgccgagaagatcaag
gacgacattatcttcgcggcctgccgggcggcgtcggcgatcgatgcctgctgtttcgat
ctcagcttcgaccatgtcgcgacgttcaagaccgcaccacgcaatgcgatcgtgctgtca
ggcaatggcgggcgggaactgctgcggcaactgcatgtccggattggcatcgagatgcac
gccatcggctgcgaccctcatgtgaaaatcgacttccagccgcatgccaccttattctac
gccgacgacgtcattgccagaaccgggcttgatgtgccgatcaccctgccggtgcgggaa
tttgtgctgttgcacaaacggcccggcgagcaagcctatgagcacatcgcgcgctggccg
ctacagaaccgcggctga
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