Rhizobium grahamii: FZ934_22740
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Entry
FZ934_22740 CDS
T06285
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rgr
Rhizobium grahamii
Pathway
rgr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FZ934_22740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgr03019
]
FZ934_22740
03009 Ribosome biogenesis [BR:
rgr03009
]
FZ934_22740
04131 Membrane trafficking [BR:
rgr04131
]
FZ934_22740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgr04147
]
FZ934_22740
Messenger RNA biogenesis [BR:
rgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FZ934_22740
Ribosome biogenesis [BR:
rgr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FZ934_22740
Membrane trafficking [BR:
rgr04131
]
SNARE
SNARE associated proteins
Others
FZ934_22740
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FZ934_22740
Exosome [BR:
rgr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FZ934_22740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_22
AAA_14
CDC48_2
AAA_33
TIP49
IstB_IS21
AAA_lid_PRS2_C
AAA_28
nSTAND3
ABC_tran
NPHP3_N
Mg_chelatase
AAA_18
RNA_helicase
AAA_7
AAA_17
DUF815
AAA_3
nSTAND_NTPase5
AAA_24
PhoH
Sigma54_activat
AAA_30
TsaE
ATP-synt_ab
Parvo_NS1
Vps4_C
ATPase_2
Zeta_toxin
NB-ARC
bpMoxR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QFY63129
UniProt:
A0A5Q0CGQ9
LinkDB
All DBs
Position
unnamed:complement(798817..801066)
Genome browser
AA seq
749 aa
AA seq
DB search
MPVSDDLTLQVANMRPQDAGASIARMSAASMTKIGIGEGDLVELIGRRHTAAIAMRPYEE
DHGLNIIRLDGLQRVNAGASSGDHVEVRKAEARPATRVVLAPAQKNLVLQGSGEALQRTF
LHLPMVAGDVVSTSVQQRVRDPRLLNLPAYGLQEIRLVVVSTQPRGIVQMTAETVVELRP
QFEEPKEARRADVTYDDIGGLGSSVEQVREMVELPLRHPELFQRLGIDPPKGVLLYGPPG
TGKTLLARAVANETEANFYHIAGPEIMGSRYGESEERLRQVFQEASQNAPSIIFIDEIDS
IAPKREQVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRRDAIDEALRRPGRFDREIV
IGVPDQNGRREVLAIHTRGMPLAEDTDLDEIARTTFGFVGADLGALVREAAMDALRRILP
DINLKEGIPTEVLEKLTVTQDDFTSALKRIQPSALREIMIQAPNVRWDDVGGLDEAQMKL
REGVELPLRSPQSFKRMGIRPAKGFLLFGPPGTGKTLLAKAVAREAEANFVATKSSDLLS
KWYGESEQQVSRLFERARQVAPTVIFIDEIDSLAPARGGGLGEPAVTERVVNTLLAEMDG
LEDMQGVVVMAATNRPNLLDPALLRPGRFDELVYVPVPDAKARRKILGIHTKKMPLATDV
DLDELAEKTERFTGADLEDLTRRAGLIALRQSLDATIVTKENFAKALEEVRPSVTPEVER
EYEEMLRTLRQENPQKMQIGFTPLRQTKE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtcagacgacctaacgcttcaagtcgcaaatatgcggccgcaggatgccggc
gcgagcatcgcgcgtatgtccgcagcttcgatgaccaagatcggcattggcgagggggac
ctcgtcgaattgatcggtcggcggcatacggctgcaatcgccatgcgcccctatgaagag
gaccacgggctcaacatcatccgactggatggcctgcagcgcgtcaacgccggcgcgtcg
agcggcgaccacgtggaagtgcgcaaagcagaagcccgtcccgcgacgagagtcgtgctg
gcgccggcgcaaaagaaccttgtccttcaggggtccggcgaggcattgcagcgcaccttc
ctgcaccttcccatggtcgccggcgatgtggtctcgacgtctgttcaacaacgggtgagg
gatccgcgcctgctgaaccttccggcctacggtttgcaggaaatcaggctggtcgtcgtc
tccacacagcctcgcgggatcgtccagatgaccgcggaaacagtcgtggagctgcgcccg
caattcgaggagccgaaggaggcacggcgggctgatgtaacctacgacgatatcggcggc
ctcggctcatccgtcgagcaagtccgtgagatggtcgaactgccgctgcgtcacccggaa
ctgttccagcgccttggcatcgatccaccgaagggcgttctcctttatggacctccaggg
acgggcaagacgcttctcgcgcgcgccgtcgccaacgagactgaagcgaatttctatcat
atcgccggccctgaaatcatgggcagccgttacggggaatccgaagagcggctgcggcag
gtcttccaggaagcctcgcaaaatgctccgtcgatcatcttcatcgacgaaatcgactca
atcgcgccaaagcgcgagcaggtaacgggagaggtggagcggcgcattgttgcccagctt
ctcacactcatggacggcctggagccccgccagaatatcgtcgtcatcggcgccaccaac
cgacgggacgcgatcgatgaagcgcttcgtcgccccggccgcttcgaccgcgagatcgtc
atcggcgttcccgatcagaatggccggcgcgaagttctggcaatccatacgcgaggcatg
ccgcttgccgaggacaccgatctcgatgagattgcacggacgaccttcggcttcgtcggg
gcggaccttggcgcgctcgtgcgcgaagcggccatggacgccctcaggcggatcctgcct
gacatcaatctgaaggaaggtattccgaccgaggtgctggagaaactgactgtcacgcag
gacgacttcacctctgcgctgaagcgtatccagccttcggcgctgcgtgaaatcatgatc
caggcgcccaacgtccgctgggacgacgtcggcggtttggacgaagcgcagatgaaactg
cgggaaggcgtggagttgccgctgcggtcgccccagtcgttcaagcggatgggaatccga
ccggcgaaggggtttttgctcttcggcccccctggcaccggcaagacactgcttgccaaa
gccgttgcccgcgaagcggaggcgaatttcgtcgcgacgaagtcgtccgacctgctgtcc
aagtggtacggcgagtccgaacagcaggtttccaggcttttcgagcgggcccgtcaggtt
gccccgaccgtgattttcatcgacgagatcgactctcttgcgcccgcgcgcggtggcggc
ctcggagagccggcggtgacggagcgggtggtgaacacgctgctcgctgaaatggatgga
ctggaggacatgcagggcgtcgtggtgatggcggcgacaaaccgaccgaacctcctcgat
cccgcgctgctccgcccaggccggttcgacgaactggtctatgtgccggtgcctgacgca
aaggcgcggcggaagatcctcggtatccataccaagaagatgccgcttgccaccgatgtc
gacctcgatgagctggcggagaaaaccgagcggttcaccggcgcagacctcgaggatctg
acccggcgggccggcttgatcgcgctgcggcagtccctcgatgcaacgatcgtcaccaag
gaaaacttcgccaaggcattggaggaggtccggccgtctgttacgcccgaggtcgagcgg
gaatacgaggagatgctgcggacgcttcggcaggaaaacccgcaaaagatgcagatcggg
ttcacgccactacgtcagacgaaggagtag
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