Rhizobium grahamii: FZ934_24600
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Entry
FZ934_24600 CDS
T06285
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgr
Rhizobium grahamii
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgr03032
]
FZ934_24600
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_24600
Enzymes [BR:
rgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FZ934_24600
DNA replication proteins [BR:
rgr03032
]
Prokaryotic type
DNA Topoisomerases
FZ934_24600
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FZ934_24600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
MBD
Motif
Other DBs
NCBI-ProteinID:
QFY64106
UniProt:
A0A5Q0CE97
LinkDB
All DBs
Position
unnamed:1208020..1209084
Genome browser
AA seq
354 aa
AA seq
DB search
MSTDRYQFRETQPENGLTEVVYSPQIEEGISRKAGKRGFLYYGPDGKRIRDRSEIERLNA
LAIPPAYTDVCINANPLAHLQATGIDARGRKQYRYHPDWLAERERAKFERLVEFGDRLPA
IRERVDTDLTAKGLSMNKAVATVVWMLDKLYIRVGNLHYAEANGSFGLTTLRRRHIRIDG
FTVLFRFKGKSGKEWNLAHADRRIAGVIRRLQDLPGQHLFKYLGPDGEYRQILSQDVNAY
IREAAGEDFSSKQFRTWGATCMAAAALAPVAVGNSKRQITSQINAAIDAVAAKLVNTRAV
CRSSYIHPAVFDDFRAGRLAELVSMRPSRSKRLTTWMNDEEIRTLRWLKTRLPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggaccgttaccagttcagagaaacccagcccgaaaacggattaaccgaggtc
gtctacagcccccagatcgaagaaggaattagccgaaaggccggaaagcggggttttctc
tactacggacccgacggaaagcggatccgcgaccgatcagaaatcgagcgcctgaatgcg
cttgcgatccctcccgcctataccgacgtctgcatcaacgccaatcctctggcgcatctg
caggcgaccggcatcgatgcgcgcgggcgtaaacagtaccgatatcatcccgactggctc
gccgaacgcgagcgcgccaagttcgagcgccttgtcgagttcggggatcggctaccggca
atccgggaacgcgtcgataccgacctgacggcgaaaggtttgtcgatgaacaaggccgtt
gcaacggtcgtctggatgctcgacaaactctacattcgcgtgggaaatctgcactacgct
gaagccaatggctcgtttggcctgaccactctgcgacgccggcacatcaggattgacggt
ttcactgtcctcttccgcttcaagggaaagtccggaaaggagtggaatctcgcccacgcc
gatcgccgcatcgccggcgtcatccgaaggctgcaggacctgccggggcagcatctgttc
aagtatcttgggcccgatggggaataccggcaaatcctgtcgcaggacgtcaacgcctat
atccgtgaagctgctggagaagacttcagctcgaagcagttcagaacttggggagcaact
tgcatggcggcggcggctctcgctcctgtggctgttggaaactccaagcggcagataacc
tcgcagatcaacgcggcaatcgatgccgtcgcagccaagctcgtcaatactcgagctgtc
tgccgatcctcctacattcacccggcggtattcgacgatttccgtgccggtcggctggca
gaactcgtcagcatgcggccgtccagaagcaagaggctcaccacctggatgaatgatgag
gaaatccggactttgcgatggttgaagaccaggctccctgcctga
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