Rhizobium grahamii: FZ934_26010
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Entry
FZ934_26010 CDS
T06285
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr00521
Streptomycin biosynthesis
rgr00523
Polyketide sugar unit biosynthesis
rgr00525
Acarbose and validamycin biosynthesis
rgr00541
Biosynthesis of various nucleotide sugars
rgr01100
Metabolic pathways
rgr01110
Biosynthesis of secondary metabolites
rgr01250
Biosynthesis of nucleotide sugars
Module
rgr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FZ934_26010 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FZ934_26010 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FZ934_26010 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FZ934_26010 (rfbB)
00525 Acarbose and validamycin biosynthesis
FZ934_26010 (rfbB)
Enzymes [BR:
rgr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FZ934_26010 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QFY63685
UniProt:
A0A5Q0CEF6
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All DBs
Position
unnamed:complement(1535393..1536439)
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AA seq
348 aa
AA seq
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MLFVTGGAGFIGSNFVLDWLSQSDEPVLNLDALTYAGNLGNLRSLEGDKRHVFVHGSIGD
GPLVERLLADYRPRAILNFAAESHVDRSIHGPADFIDTNIVGTFRLLEAARAYWSSSKDD
SFRFLHISTDEVFGALGADDEAFHEETQYQPNSPYSASKAASDHLVRAYHHTYGLPVLTT
NCSNNYGPFHFPEKLIPLVINNALFGRPLPLYGDGQQIRDWLYVKDHCSALRRVLQSGVP
GRTYNVGGWNERTNLAVVQSICDLLDELKPRDDGQSYRRQITFVTDRPGHDRRYAIDARR
IESELGWRPSETFESGIRKTVGWYLENAEWVRNVTSGSYRNWLEKQYA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttcgtaacgggtggcgccggattcatcggctcaaatttcgtcctcgactggctg
tcgcaaagcgacgagccggtgcttaatttggacgcgctgacctacgccggaaacctcggc
aatcttcgcagtctcgaaggcgacaagcggcatgttttcgtccacggcagcattggtgac
ggcccgcttgtcgagcgactgctggcagactatcggccgagggccatcctcaatttcgcg
gctgaaagccatgtcgacaggtccattcatggccccgccgacttcatcgacacgaatatc
gtcggtaccttccgcctgctggaggcggcgcgcgcatactggagcagctccaaggacgac
tcgtttcgcttcctgcatatctcgacggatgaagtctttggcgcactcggcgctgacgat
gaagcgttccatgaggagacgcaataccaaccgaacagcccctattccgcaagcaaggcg
gccagtgatcacctcgtaagggcatatcaccacacctatgggctcccggttctcacgacc
aattgctcgaacaactacgggccattccactttccggagaagctcatcccgctggtgatc
aacaatgcgttgttcgggcgacctttgccgctttacggcgatggccagcagatccgggat
tggctctacgtcaaggaccattgcagcgcgctgcgccgtgtattgcaatcaggtgtgccc
gggcgaacctacaatgtcggcggctggaacgaacgcaccaatctcgctgtcgtgcaatcg
atctgcgatcttctcgacgaactgaaaccgagagatgatggtcagtcgtatcgacggcag
atcacgttcgttacggatcgtccggggcacgatcgccgctatgcgattgacgcgcgcagg
atcgagagtgagcttggttggcgcccaagcgagacattcgaaagcggcatacgaaaaacc
gtcggctggtatctcgaaaatgccgaatgggtgcgcaacgtcacatccggcagctatcgc
aactggcttgagaagcaatacgcatga
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