Piscinibacter gummiphilus: A4W93_07720
Help
Entry
A4W93_07720 CDS
T04831
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4W93_07720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgu03019
]
A4W93_07720
Enzymes [BR:
rgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4W93_07720
Messenger RNA biogenesis [BR:
rgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4W93_07720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ARN23779
UniProt:
A0A1W6LHS3
LinkDB
All DBs
Position
complement(1725512..1726771)
Genome browser
AA seq
419 aa
AA seq
DB search
MTFDALGLAPRLLDRALDEGFATPTPVQAAAIPLVLQGRDLRASARTGSGKTAAYVLPLL
QRFATAEITTPRRVTTLILVPTRELAAQVAATLRGLAPALARPPKIECVFGGVSINPQMM
ALRGGADVVIATPGRLLDLVHHNAVSLSRVATLVLDEADRMLDKGFADELGLILQLLPAK
RQNLLFSATFPPAVRALAESHLRDPAVVDVADEPLVVPAIRQRAIEVDEPKRTALLAHLI
REEGWSRALVFVASQYAAEHVAEKLRRRDIKAAAFHGDLSQGARTQLLEDFKDGYGQVVV
ATDLASRGIHIADLPVVVNYDLPRSATDHVHRIGRTGRAGADGLAVSFVMADTEAHFRLI
EKRQGARVPRERIAGFEPTAVATEAQATGGIKGKRKSKKDKLRELAAEAEAAVAARNKP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttcgacgcgctgggcctcgccccgcggctgctcgaccgtgccctcgacgagggc
ttcgccacgcccacgccggtccaggccgccgccatccccctcgtgctgcagggccgcgac
ctgcgggcctccgcgcgcaccggctccggcaagacggccgcctacgtgctgccgctgctg
cagcgcttcgccacggccgagatcaccacgccgcgccgcgtcaccacgctgatcctcgtg
cccacccgggagctcgccgcccaggtggccgccacgctgcgcggcctcgcgccggcgctc
gcgcgcccgccgaagatcgagtgcgtgttcggcggggtctccatcaacccgcagatgatg
gcgctgcgcggcggcgccgacgtggtgatcgccacgcccggccggctgctcgacctcgtg
caccacaacgccgtgtcgctgtcgcgcgtggccacgctcgtgctcgacgaggccgaccgc
atgctcgacaagggcttcgccgacgaactgggcctgatcctgcagttgctgccggccaag
cgccagaacctgctgttctccgccaccttcccgccggccgtgcgcgcgctcgccgaaagc
cacctgcgcgacccggccgtcgtcgacgtggccgacgagcccctcgtggtgccggccatc
cggcaacgcgcgatcgaggtcgacgaacccaagcgcaccgcgctgctcgcccacctgatc
cgcgaggagggctggtcccgcgcgctcgtgttcgttgcatcgcagtacgccgccgaacac
gtggccgagaagctccgccgccgcgacatcaaggccgccgccttccacggcgacctgagc
cagggcgcccgcacccagctgctcgaggacttcaaggacggctacggccaggtggtggtg
gccaccgacctcgcgtcgcgcggcatccacatcgccgacctgccggtggtggtgaactac
gacctgccccgctctgccaccgaccacgtgcaccgcatcggccgcacgggccgcgccggc
gccgacggcctggccgtgagtttcgtgatggccgacaccgaggcgcacttccgcctcatc
gagaagcgccagggcgcgcgggtgccgcgcgagcgcatcgccgggttcgagcccaccgcg
gtcgccacggaggcccaggccaccggcggcatcaagggcaagcgcaagagcaagaaggac
aagctgcgggagctggcggcggaggccgaggccgccgtggccgctcgcaacaaaccgtag
DBGET
integrated database retrieval system
