Piscinibacter gummiphilus: A4W93_14125
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Entry
A4W93_14125 CDS
T04831
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A4W93_14125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgu03400
]
A4W93_14125
Enzymes [BR:
rgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A4W93_14125
DNA repair and recombination proteins [BR:
rgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A4W93_14125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARN20943
UniProt:
A0A1W6L9M3
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All DBs
Position
3176313..3177677
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AA seq
454 aa
AA seq
DB search
MIDAAEPRRERMVWGVAALVHAVADTLAARYASCTVRGELSGFTKAGSGHCYLSLKDADG
GNALLRCAMFRRTAAMLDFVPRDGQLVEVRGRVAVYEPRGDLQFVVEAMRPAGAGALFEQ
FLRLKARLEAEGLFDDELKRALPPYPRSVGVVTSLGAAALHDVLTALRRRAPHVSVVLYP
SLVQGADAPPALVAAIEEAGRRAEVDTLIVCRGGGSLEDLWAFNDERVVRAVAACPLPVV
CGVGHETDVTLSDLAADVRAPTPTAAAELVSPTREGGLAVLATLAGVMSNRVHQVLDTQA
QRLDRATMRLMRPADGVRRHAQRLTLLAQRLGASTRQVVREQGQRHDTLAARLLRATTVV
HARQPARLDALAGRLSRAVAVSRDTRQARLAALGSRLETLDPKRVLSRGYAWLEDAQGQA
VTAAASLSPGQSVRAVLADGAVVAEVRQVDVDPT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgccgcggagccgcgtcgcgagcggatggtgtggggtgtggccgcgctggtg
catgccgtggcggacacgctcgccgcgcgctacgcgtcgtgcacggtgcggggcgagctg
tcgggcttcactaaggccggcagcggccactgctacctgagcctgaaggacgccgacggg
ggcaacgcgctgctgcgctgcgcgatgttccgtcgcacggcggcgatgctcgacttcgtg
ccgcgcgacgggcagctcgtcgaggtgcgcggccgggtcgcggtgtacgagccgcgcggc
gacctgcagttcgtcgtggaggccatgcggccggccggggccggcgcgctgttcgagcag
ttcctgcggctgaaggcacggctggaggccgaggggctcttcgacgacgagctcaagcgg
gcgctgccgccgtaccctcggtcggtgggcgtggtcacgtcgctgggcgcggccgcgctg
cacgacgtgctcaccgcgctgcgccgccgtgcgccccatgtgtcggtggtgctgtacccg
agcctggtgcagggcgccgatgcgcctccggcgctcgtggccgccatcgaggaggcgggg
cggcgcgccgaggtcgacacgctgatcgtgtgccggggcggcggatcgctcgaggacctg
tgggccttcaacgatgaacgggtcgtgcgcgccgtggcggcgtgcccgctgcccgtggtg
tgcggcgtgggccacgagaccgacgtcacgctgagcgacctcgccgccgacgtgcgcgcg
cccacgcccaccgcggcggccgaactcgtctcgcccacgcgcgagggcgggctggccgtg
ctggccacgctcgccggggtcatgtcgaaccgcgtgcaccaggtgctcgacacgcaggcc
cagcgcctcgaccgcgcgacgatgcgcctgatgcggccggccgacggcgtgcggcggcat
gcgcagcgcctgaccctgctggcgcaacgcctcggcgcgtccacgcgccaggtggtgcgc
gagcaggggcagcgccacgacacgctcgccgcgcggctgctgcgggccaccaccgtcgtg
cacgcccgccagccggcacggctggacgcgctcgccggacgcctgtcgcgcgcggtggcg
gtgtcgcgcgacacgcgccaggcccggctggccgcgctcggttcgcgcctcgaaacactc
gatccgaagcgggtgctgtcgcgcgggtacgcgtggctggaggatgcgcagggccaggcg
gtcaccgcggcggcgagcctgtcgccgggccagtcggtgcgggccgtgctggccgacggc
gcggtggtcgcggaggtgcggcaggtggacgtcgacccgacctaa
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