Piscinibacter gummiphilus: A4W93_15015
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Entry
A4W93_15015 CDS
T04831
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rgu
Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rgu03000
]
A4W93_15015
Transcription factors [BR:
rgu03000
]
Prokaryotic type
Helix-turn-helix
Other families
A4W93_15015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_4
HTH_30
PAS
AAA
HTH_23
PAS_8
HTH_28
Mg_chelatase
AAA_16
PAS_9
HTH_22
AAA_2
NUMOD1
HTH_29
HTH_7
Diguanyl_cycl_sensor
HTH_3
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARN21099
UniProt:
A0A1W6L9X3
LinkDB
All DBs
Position
complement(3372461..3374452)
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AA seq
663 aa
AA seq
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MTSELNASATPRDGLIERAHQRSEALGLTRGERRDFDPLVRSDLAVARERNRRLCLHAAP
VMHLLFEQIVNTQSMIVLTDAQGTILHSVGDDDFLQRAQKVALAPGENWAEHSKGTNAIG
TALFEEAPTLVHANEHYMLANSFLTCSASPIFDPRGSMLGVLDVTGDHRGYHQHTMGLVR
MSARMIENHWLSDDYNHRLRLHFHSRAEFIGTLLEGILVVGPDGRIIGANPSALEQLGHS
GASLRAQSLASLFGTTPSAVYDHFRMPMSAPMQLTLPDGRPFHVSARFDWPSRPVVAGLG
MADGDEAAAAPRAPAVRRVEPAAAQPPAFSGLQYLRTGDPQLDVLVQKVRRVLDRDIPLL
VLGETGTGKELLARAVHHDSSRRNAPFVAVNCASIPESLIEAELFGYEDGAFTGARRKGA
PGRLVQANGGTLFLDEIGDMPLPLQARLLRVLQERSVTPLGSTRSIPIDIMLIGATHRNL
REMIDQHTFREDLYYRLNGLALKLPALRERTDLEAVARRILMAERPQDPPDLSSPVRALF
RRYAWPGNIRQLANVLRTAAVMSAGEHEITTAHLSDDFLEEARQAGHTPAPAPVCLAAEP
LPVPEVPRPAAAVPAHTLEQAEIELIRSTLEALGGNISAASKQLGISRNTIYRRLRGQGA
ETP
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgagctgaacgcatccgccaccccgcgcgacgggctcatcgaacgggcccac
cagcgcagcgaggcgctgggcctgacccgcggtgaacggcgcgacttcgacccgctcgtg
cgcagcgacctcgcggtggcccgcgagcgcaaccgccgcctgtgcctgcacgccgcgccg
gtcatgcacctgctgttcgagcagatcgtcaacacgcagagcatgatcgtcctcaccgac
gcgcagggcaccatcctccattcggtgggcgacgacgacttcctgcagcgcgcgcagaag
gtcgcgctggcccctggagagaactgggccgaacactccaagggcaccaacgccatcggc
accgcgctgttcgaggaggcgcccacgctggtccacgcgaacgaacactacatgctggcg
aacagtttcctcacgtgttccgcgtcgcccatcttcgacccgcgcggcagcatgctgggc
gtgctcgacgtcaccggcgaccaccgcggctaccaccagcacacgatgggcctcgtgcgc
atgtccgcacgcatgatcgagaaccactggctctccgacgactacaaccaccgcctgcgc
ctgcacttccacagccgcgcggaattcatcggcacgctgctcgagggcatcctcgtcgtg
ggcccggacgggcgcatcatcggcgccaatcccagcgcgctcgagcagctgggccacagc
ggcgcctcgctgcgcgcgcagagcctcgcctcgctgttcggcaccacgccgtcggcggtc
tacgaccacttccgcatgcccatgtccgcgcccatgcagctcacgctgcccgacgggcgc
ccgttccatgtgagcgcgcggttcgactggccgtcgcggcccgtggtcgcggggctcggc
atggccgatggcgacgaggccgcagccgcgccgcgcgcgcccgccgtgcgccgcgtggag
cccgccgcggcgcagccgccggcgttctcgggcctgcagtacctgcgcaccggcgacccg
cagctcgacgtgctcgtgcagaaggtgcgccgcgtgctcgatcgcgacatcccgctgctc
gtgctcggcgagaccggcactggcaaggagctgctcgcgcgggcggtgcaccacgactcc
agccggcgcaacgcacccttcgtcgcggtgaactgcgcgtccatccccgagtcgctgatc
gaggccgaactgttcggctacgaagacggtgcgttcaccggcgcccggcgcaagggcgca
ccgggccggctcgtgcaggccaatggcggcacgctcttcctcgacgagatcggcgacatg
ccgctgccgctgcaggcccgcctgctgcgcgtgctgcaggagcgcagcgtcacgccgctc
ggcagcacgcggtccatccccatcgacatcatgctgatcggtgccacgcaccggaacctg
cgcgagatgatcgaccagcacacgttccgcgaggacctgtactaccgcctgaacggcctg
gcgctcaagctgccggcgttgcgcgaacgcaccgacctcgaggccgtggcccgccgcatc
ctgatggccgaacgaccgcaggacccgcccgacctcagcagcccggtgcgtgcgctgttc
cgccgctatgcgtggcccggcaacatccgccagctcgcgaacgtgctgcgcacggcggcc
gtgatgtcggccggcgaacacgagatcaccacggcccacctgtcggacgacttcctggag
gaggcgcggcaggccggccacacccccgcgcccgcgccggtgtgcctcgccgcggaaccg
ttgccggtgcccgaagtgccgcgtcccgccgcggccgtgccggcccacacgctggagcag
gccgagatcgagctgatccgctcgacgctcgaagcgctcggcggcaacatctcggcggcg
tcgaagcagctgggcatcagccgcaacaccatctaccgccggctgcgcgggcagggcgcc
gagacgccctga
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