Piscinibacter gummiphilus: A4W93_15570
Help
Entry
A4W93_15570 CDS
T04831
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4W93_15570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgu03400
]
A4W93_15570
Enzymes [BR:
rgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4W93_15570
DNA repair and recombination proteins [BR:
rgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4W93_15570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
nSTAND3
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ARN23908
UniProt:
A0A1W6LI62
LinkDB
All DBs
Position
complement(3490227..3492164)
Genome browser
AA seq
645 aa
AA seq
DB search
MDAFDDLLPPERRPPLSGAEALEELHRWADAGWIRHLDHMFARFVAELSPHDPAPVLMAA
ALLVHMEGRGHTCLVIDDGIAKVADLLGWTGTQAEAWEAVAARLPRTAADWLDALRHSPV
VGEGSGGSEPLVLSAGRLYLRRYWVDEQRVATQVSRRVSHHAPVDEAVARRWLDALFPPD
DTFDWQKFACAVALRSRLSVITGGPGTGKTYTAARLLALLWAVDPAPARLRIALAAPTGK
AAARLKQSISSALIELQGRVGDSLALSEWVGHLESARTLHSLLGARPGTRRLQHDAAHPL
DVDVLLVDEASMVHLEMMASLLDALPPHARIVLLGDKDQLASVEAGAVLGDLCRGAEQGR
YDAETLRYAEAVTGQVLPPAFATGGPPLAQQTVMLRRSRRFDGAIGQLALAVNDGDAARA
SALLRDRAHAAELGWPADPSATVAVRLAVDGYRGCFEAVRDGADPITVLTAFDRFRLLCA
VRDGAWGVVDLNAAVQRALADAGLLRPSGEWYEGRPVMVTRNIAGSGVFNGDIGIALRVP
GGALRVHFLEGDTVRSVGVSRLADVETAFAMTVHKSQGSEFEHTVLVLPEAPSRVLTREL
VYTGITRARKRFTLVSGRERAFAEALAERTQRFSGLLDVLAEAVT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcgacgacctgttgccgccggagcgtcggccgccgctgtcgggcgcggag
gcgctcgaggaactgcaccgctgggccgacgcgggctggatccgccacctcgaccacatg
ttcgcgcgcttcgtcgccgagctctcgccgcacgatcccgcgccggtgctgatggcggcg
gcgctgctcgtgcacatggaagggcgcgggcacacgtgcctcgtgatcgacgacggcatc
gcgaaggtggccgacctgctgggctggaccggcacgcaggccgaagcctgggaagcggtc
gccgcacgcctgccgcgaacggctgcggactggctcgacgcgctgcgccacagccccgtg
gtgggcgaggggtccggtggcagcgaaccgctggtgctgtccgcggggcggctctacctg
cgccgctactgggtcgacgaacagcgcgtggccacgcaggtgtcgcgccgggtgtcccac
catgcgccggtcgacgaggccgtggcccgccgctggctcgacgcgctgttcccgcccgac
gacaccttcgactggcagaagttcgcgtgtgccgtggcgctgcgctcgcgcctgtcggtc
atcaccggcggcccgggcacgggcaagacgtacaccgcggcccgcctgctcgcgctgctg
tgggccgtggacccggcgcccgcgcggctgcgcatcgcactcgcggcgcccacgggcaag
gcggcggcgcggctgaagcagtcgatctccagtgcgctcatcgaactgcaggggcgggtg
ggggactcgctcgcgctgtccgagtgggtggggcacctcgagtcggcccgcacgctgcac
tcgctgctgggcgcacgcccgggcacgcgccggctgcagcacgacgcggcccatccgctc
gacgtggacgtgctgctggtcgacgaggcgtcgatggtgcacctcgagatgatggcgtcg
ctgctcgacgcgctgccgccgcacgcgcgcatcgtgctgctgggcgacaaggaccagttg
gcctcggtggaggccggcgccgtgctgggtgacctctgccgcggcgcggagcaggggcgc
tacgacgccgagacgttgcggtacgccgaggccgtgacgggccaggtcctgccgccggcg
ttcgccacgggcggcccgccgctcgcgcagcagacggtgatgctgcgccgcagccgccgc
ttcgacggcgccatcggccagctcgcgctcgcggtcaacgacggcgacgcggcccgcgcg
tcggcgctgctgcgcgaccgcgcccacgcggccgaactcggctggcccgcggatccctcg
gccaccgtggccgtgcggctggccgtcgacggctaccgcggctgtttcgaggccgtgcgc
gacggcgccgaccccatcaccgtgctgaccgcgttcgatcgcttccgcctgctgtgcgcg
gtgcgcgacggcgcgtggggcgtggtggacctcaacgcggcggtgcagcgtgcgctggcc
gatgccgggctgctgcgcccgtcgggcgagtggtacgagggccggccggtgatggtgacc
cgcaacatcgccggcagcggcgtgttcaacggcgacatcggcatcgcgctgcgcgttccc
gggggggcgctgcgcgtgcacttcctggagggcgacaccgtgcggtcggtgggcgtgagc
cgcctcgccgacgtcgagaccgcgttcgcgatgacggtgcacaagtcccagggctccgag
ttcgagcacaccgtgctcgtgctgcccgaggcacccagccgggtgctgacgcgggagctg
gtctacacgggcatcacgcgggcgcgcaagcgcttcacgctggtgagcgggcgggagcgg
gcgttcgcggaggcgctggcggagcggacgcagcggttcagcggcttgctcgacgtgctg
gccgaagcggtgacctga
DBGET
integrated database retrieval system
