KEGG   Piscinibacter gummiphilus: A4W93_16535
Entry
A4W93_16535       CDS       T04831                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rgu  Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:rgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rgu03032]
    A4W93_16535
   03036 Chromosome and associated proteins [BR:rgu03036]
    A4W93_16535
   03400 DNA repair and recombination proteins [BR:rgu03400]
    A4W93_16535
DNA replication proteins [BR:rgu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    A4W93_16535
Chromosome and associated proteins [BR:rgu03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    A4W93_16535
DNA repair and recombination proteins [BR:rgu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      A4W93_16535
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 UBA_HYPK
Other DBs
NCBI-ProteinID: ARN21373
UniProt: A0A1W6LAV5
LinkDB
Position
complement(3687926..3688198)
AA seq 90 aa
MNKSELIEHIAKQADISKAAATRALEALIGGVKSTLKKNNSVSLVGFGTFSVTKRAARAG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaaatccgaattgattgagcacattgccaagcaagccgacatttcgaaagctgcg
gcaacgcgcgcgctggaagccctgatcggtggtgtgaaatcaacactcaagaaaaacaac
agcgtctcgctggtgggtttcggaaccttcagcgtcacgaagcgcgccgcgcgcgccggc
cgcaacccgcgcacgggtgccgccatcaagatcaaggcagccaaggtgccgaagttccgt
ccgggcaaggccctcaaggacgcgctgaactga

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