Piscinibacter gummiphilus: A4W93_18110
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Entry
A4W93_18110 CDS
T04831
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A4W93_18110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgu03019
]
A4W93_18110
03009 Ribosome biogenesis [BR:
rgu03009
]
A4W93_18110
Messenger RNA biogenesis [BR:
rgu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4W93_18110
Ribosome biogenesis [BR:
rgu03009
]
Eukaryotic type
Pre-60S particles
RNases
A4W93_18110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2098
Motif
Other DBs
NCBI-ProteinID:
ARN21653
UniProt:
A0A1W6LBN6
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All DBs
Position
complement(4041802..4042377)
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AA seq
191 aa
AA seq
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MTDTTSATPTLASSDQNLVWIDLEMTGLYPNTDRIIEIAVVVTDATLTQRVEGPVFAVHQ
SDATLDAMDAWNKGTHGKSGLIDRVKASTFDEAAAEAQVIEFLKQYVPKNTSPMCGNSIC
QDRRFLANYMPKLEAFFHYRNLDVSTLKELAKRWKPGILGGFKKAQAHTALADIHESIDE
LVYYRTHFLSL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacctccgcgaccccgacgctggccagcagcgaccagaacctcgtctgg
atcgacctcgaaatgacgggcctgtacccgaacaccgaccgcatcatcgagatcgccgtc
gtcgtcaccgatgccacgctgacccagcgcgtcgagggcccggtgttcgccgtgcaccag
tccgacgccacgctcgacgcgatggacgcgtggaacaagggcacgcacggcaagagcggc
ctgatcgaccgggtcaaggcctccacgttcgacgaggccgcggccgaggcccaggtcatc
gagttcctgaagcagtacgtgccgaagaacacgtcgcccatgtgcggcaacagcatctgc
caggaccgccgcttcctcgcgaactacatgccgaagctggaagccttcttccactaccgc
aacctcgacgtcagcacgctcaaggaactggccaagcgctggaagccgggcatcctcggc
ggcttcaagaaggcccaggcccacacggcgctggccgacatccacgaatccatcgacgaa
ctggtgtactaccgcacgcacttcctgtccctctga
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