Piscinibacter gummiphilus: A4W93_20550
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Entry
A4W93_20550 CDS
T04831
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu03420
Nucleotide excision repair
rgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4W93_20550
03430 Mismatch repair
A4W93_20550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgu03400
]
A4W93_20550
Enzymes [BR:
rgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4W93_20550
DNA repair and recombination proteins [BR:
rgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4W93_20550
MMR (mismatch excision repair)
Other MMR factors
A4W93_20550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ARN22096
UniProt:
A0A1W6LCY6
LinkDB
All DBs
Position
complement(4547907..4550267)
Genome browser
AA seq
786 aa
AA seq
DB search
MHSPVSSDPTSPLLHNLNPEQLAAVTLPARPALILAGAGSGKTRVLTTRIAWLIQTGQLS
PGGVMAVTFTNKAAKEMLTRLGAMLPMPVRGMWIGTFHGLCNRFLRAHWKLAGLPQGFQI
LDSADQLSAVKRVIKAMNLDEERYVPKQITWAIAGAKEEGLRPGDIEVHDAQSRVLAEVY
QAYEDQCQREGVVDFAELMLRTYEILRDNAALRDHYQHRFRHILVDEFQDTNKLQYAWLK
MFAGPHTAVFAVGDDDQSIYAFRGAQVGNMTDFEREFKVQQVIKLERNYRSFGNILDAAN
ELIAHNSKRLGKNLSTEAGPGEPVRVFEATSDFAEAQWFVDEAKQLHRDGVNRSDIALLY
RSNAQSRVMESALFNAGVPYKVYGGLRFFERAEVKHALSYLRLIENPNDDTSFLRVVNFP
ARGIGARSVEQLQDAARTSGRSLSQSVGAVAGKSGSNLQGFVALIDAMREGTRGLTLREI
IEHMLHHSGLVTFYTTDKDGKDRLENLEELVNAAEAFVTQEGFGKDAVALPVDEHAGALA
EGLPVAVAAVDLTPDAETGEIMSPLAAFLTHASLEAGDNQAQAGQDAIQLMTVHAAKGLE
FDAVFITGLEEGLFPNEKSVADINGIEEERRLMYVAITRARKRLYLSFSQTRMLHGQTRY
NVKSRFFDELPENTLRWLTPRNQGFGSGFAREYQSAWQKGSGLSGIVGAGQQAPRPNTLN
TASSAGPKTTTAQGLKSGQSVFHNKFGEGVILTIEGQGEDARAQVNFGRHGMKWLQLSIA
KLTPVD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccctgtttcctccgatccgacgtccccgctgctgcacaacctgaatccggaa
cagctcgcggccgtcacgctcccggcgcgtcccgcgctgatcctggccggggcggggtcg
ggcaagacccgggtgctgaccacccgcatcgcgtggctcatccagaccggccagctgtcg
cccggcggcgtgatggcggtgaccttcacgaacaaggccgcgaaggaaatgctcacccgc
ttgggcgcgatgctgccgatgcccgtgcggggcatgtggatcggcacgttccacggcctg
tgcaaccgcttcctgcgggcgcactggaaactcgccgggctgccgcagggcttccagatc
ctcgactcggccgaccagctgtcggccgtgaagcgggtgatcaaggcgatgaacctcgac
gaggaacggtacgtccccaagcagatcacctgggccatcgccggcgccaaggaagagggc
ctgcgcccgggcgacatcgaggtgcacgacgcgcagagccgcgtgctcgccgaggtgtac
caggcctatgaagaccagtgccagcgcgagggcgtggtcgacttcgccgagctgatgctg
cgcacgtacgagatcctgcgcgacaacgccgcgctgcgcgaccactaccagcaccgcttc
cgccacatcctcgtcgacgagttccaggacaccaacaagcttcagtacgcgtggctgaag
atgttcgccggcccccacaccgcggtgttcgcggtgggtgacgacgaccagagcatctac
gcgttccggggcgcccaggtgggcaacatgaccgacttcgaacgcgagttcaaggtgcag
caggtcatcaagctcgagcgcaactaccgctcgttcggcaacatcctcgacgcggccaac
gaactgatcgcccacaactccaagcgcctcggcaagaacctcagcaccgaggccggcccc
ggcgaaccggtgcgggtgttcgaggccacgagcgacttcgccgaggcccagtggttcgtc
gacgaggcgaaacagctgcaccgggacggcgtgaaccgcagcgacatcgcgctgctgtac
cgcagcaacgcgcagagccgcgtgatggaaagcgcgctgttcaatgccggcgtgccgtac
aaggtgtacggcggcctgcgcttcttcgaacgcgccgaggtgaagcacgcgctgagctac
ctgcgcctgatcgagaacccgaacgacgacaccagcttcctgcgcgtggtgaacttcccc
gcacgcggcatcggtgcgcgcagcgtcgagcagctgcaggacgccgcccgcaccagcggc
cgcagcctgagccagagcgtgggcgcggtggccggcaagagcggctcgaacctgcagggc
ttcgtggccctgatcgacgcgatgcgcgagggcacgcgcggcctcacgctgcgcgagatc
atcgagcacatgctgcaccactcgggcctcgtcacgttctacacgacggacaaggacggc
aaggaccgcctcgagaacctggaggaactggtcaacgccgcggaggccttcgtcacgcag
gaaggcttcggcaaggacgccgtggccctgccggtggacgaacacgccggcgcgttggcc
gagggcctcccggtggccgtggccgccgtggacctcacgcccgacgccgagaccggcgag
atcatgtcgcccctcgcggccttcctcacgcacgcctcgctcgaggccggcgacaaccag
gcacaggccgggcaggacgccatccagctgatgaccgtgcacgcggccaagggcctcgag
ttcgacgcggtgttcatcaccggcctcgaggaagggctgttcccgaacgagaagagcgtg
gccgacatcaacggcatcgaggaggagcgccggctgatgtacgtggccatcacgcgcgcg
cgcaagcggctgtacctgagcttcagccagacgcgcatgctgcacggccagacccgctac
aacgtcaagagccgcttcttcgacgagctgcccgagaacacgctgcgctggctcacgccg
cgcaaccagggcttcggctcgggtttcgcgcgcgaataccagtcggcctggcagaagggc
tccggcctgtcgggcatcgtgggcgccggccagcaggcaccgcggcccaacacgctcaac
accgccagcagcgccggaccgaagaccaccacggcccagggcctgaagtccggccagtcg
gtgttccacaacaagttcggcgagggcgtgatcctcaccatcgaagggcagggcgaggac
gcccgcgcccaggtgaacttcggccgccacgggatgaagtggctccagctgagcatcgcg
aagctgacgccggtggattga
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