Piscinibacter gummiphilus: A4W93_22210
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Entry
A4W93_22210 CDS
T04831
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
rgu
Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rgu03000
]
A4W93_22210
Transcription factors [BR:
rgu03000
]
Prokaryotic type
Helix-turn-helix
Other families
A4W93_22210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS
AAA_5
PAS_4
PAS_8
Mg_chelatase
PAS_9
HTH_24
AAA_2
AAA
HTH_30
PAS_GdpP
AAA_7
nSTAND3
ATPase
AAA_16
DUF6262
PAS_10
HTH_psq
AAA_22
PAS_7
TIP49
Motif
Other DBs
NCBI-ProteinID:
ARN24004
UniProt:
A0A1W6LI88
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Position
complement(4881574..4883382)
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AA seq
602 aa
AA seq
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MYKAVADVEVLDKGFDEAVAELRARPADVVVAAGSNGAFLRQQLDVPVVLVKVGGFDVMR
ALGRARGVATRIALVTYGDVPDEVQQFDRLFGLGIVQRAYTTEEDARDVVRELKALGTEA
VVAPGLVADLADEAGMVGVFLYSQDAVREALDDAIEMARIGRIELAKRERLNTVLGQLTD
GVVAVDLKECIDTVNPAMAKFLGAPAEALLGRPLSEVAPELSLRHTLRDARDEPEQIHRH
GNRTLVASRMPILEQGRLTGAVLTCQDAVSIHRVDRHLRARQAPREAQARYELGHLIGTS
AAVVSAKARAEHCARSQATVLITGESGTGKELLAQGIHNAGSRRRQPFVAINCAAFPESL
LEGELFGHEEGAFTGARRGGRAGLFEAAHTGTIFLDEVGEMPVSLQTRLLRVLQEREIVR
IGATEPIPIDVRVIAATHRDLKAQVAGGGFRNDLYYRLNILGLSLPPLRERLQDLPLLFA
HLLDKVSSRVGLSPAPLEAVWPDLLALGGAYGWPGNVRELENIVERLVVHGSELSGGREA
LRALVPEWFESAPAPSLSDQRRAADLRHVHEVLAACGGDRTLACERLGISRTTLWRRLQE
DS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggccgtggccgacgtcgaggtgctcgacaagggcttcgacgaggccgtggcc
gaactgcgcgcccgacccgccgacgtggtggtggccgccggctccaacggcgccttcctg
cgccagcagctcgacgtgccggtggtgctggtcaaggtgggcggcttcgacgtgatgcgg
gccctgggccgggctcgcggcgtggccacgcgcatcgccctcgtgacctatggcgacgtg
cccgacgaggtgcagcagttcgaccgcctgttcggcctcggcatcgtgcagcgcgcgtac
accacggaagaggacgcccgcgacgtggtgcgcgagctgaaggcgctgggcaccgaggcc
gtggtggcgccggggctggtcgccgacctcgccgacgaggccggcatggtgggtgtgttc
ctgtattcgcaggacgcggtgcgcgaggccctcgacgacgccatcgagatggcccgcatc
ggccgcatcgaactcgccaagcgcgagcggctcaacaccgtgctgggccagctcaccgac
ggcgtggtggcggtggacctgaaggagtgcatcgacacggtgaacccggcgatggcgaag
ttcctcggtgcgcccgccgaagcgctgctggggcggccgctgagcgaggtggcgcccgag
ctgagcctgcgccacacgctgcgcgacgcgcgcgacgaacccgagcagatccaccgccac
ggcaaccgcaccctggtcgcgagccgcatgcccatcctggaacagggccggctcacgggc
gcggtgctgacgtgccaggacgccgtctccatccaccgcgtggaccgccacctgcgcgcg
cgccaggcgccgcgcgaggcgcaggcgcgctatgaactgggccacctgatcggcaccagt
gcggcggtggtgtcggcgaaggcccgggccgaacactgcgcgcgcagccaggccacggtg
ctgatcaccggcgagagcggcaccggcaaggagctgctcgcgcagggcatccacaacgcg
ggcagccggcggcgccagcccttcgtggcgatcaactgcgcggccttccccgaatcgctg
ctcgaaggcgaactgttcggccacgaggaaggggccttcaccggcgcgcgccgtggcggc
cgcgcggggctgttcgaggccgcgcacaccggcaccatcttcctcgacgaggtgggcgag
atgcccgtgtcgctgcagacgcggctgctgcgcgtgctgcaggagcgcgagatcgtgcgc
atcggcgccacggaacccatcccgatcgacgtgcgcgtgatcgcggccacgcaccgcgac
ctgaaggcgcaggtggccggcggcggcttccgcaacgacctgtactaccggctgaacatc
ctcggcctgtcgctgccgccgctgcgcgagcggctgcaggacctgccgctgctgttcgcc
cacctgctcgacaaggtctcgtcgcgcgtgggcctgtcgcccgcgccgctggaggccgtg
tggcccgacctgctggcgctcggcggggcgtacggctggccgggcaacgtgcgcgagctg
gagaacatcgtcgagcggctcgtggtgcacgggtcggagctgtcgggtgggcgcgaggcg
ctgcgggcgctggtgccggaatggttcgagtccgctccagcgccctcgctgtcggaccag
cgccgtgccgccgacctgcgccacgtgcacgaggtgctggccgcgtgcggcggcgaccga
acgctcgcgtgcgagcgcctgggcatcagccgcacgacgctgtggcgccgcctgcaggag
gattcatga
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