Piscinibacter gummiphilus: A4W93_23895
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Entry
A4W93_23895 CDS
T04831
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rgu
Piscinibacter gummiphilus
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgu03400
]
A4W93_23895
Enzymes [BR:
rgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A4W93_23895
DNA repair and recombination proteins [BR:
rgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A4W93_23895
Prokaryotic type
A4W93_23895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LANC_like
Motif
Other DBs
NCBI-ProteinID:
ARN22705
UniProt:
A0A1W6LEJ9
LinkDB
All DBs
Position
5249209..5250684
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AA seq
491 aa
AA seq
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MPHRERPLDKPLPSALVWFRRDLRADDHAALYHALKAARKVWCVFFLDRDILDPLPQADR
RVEFIVDSLHALDAQLRALNPEARLIVRHAHAGTALPRLADELHVQAVYASHDDEPAALA
RDHAVRGALAEMGIALHTAKDHVIFERNEVLTATGKPYSVFTPYKNAWLKKLEPFYLKAY
PVARYADALAPLPDDVPAHLPTLSGIGFEPTNLHELALGAGSEGAQALLADFLPRIDRYD
VARDFPSVKGPSYLSMHLRFGTVSIRQLAREAHAHRSKGAQTWLSELVWRDFYHQVLHHH
PHVAESAFKPAYDAIKWERGKHADTLFAAWCHGRTGYPLVDAAMAQINQTGYMHNRLRMV
VASFLVKDLGIDWRRGEAYFAEKLNDFDLAANNGGWQWAASTGCDAQPYFRIFNPITQSE
KFDPEGKFIRRYLPELAGLSNKAIHAPWLARPLELAEARIVIGQDYPAPIVDHDEARAKT
LARYAVVKAGD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccgcgaacgcccgctcgacaagcccctgccgtcggccctggtgtggttccgc
cgcgacctgcgcgccgacgaccacgccgcgctgtaccacgcgctgaaggcggcccggaag
gtctggtgcgtgtttttcctcgaccgcgacatcctcgaccccctgccccaagccgaccgc
cgcgtggagttcatcgtcgacagcctgcacgcgctcgacgcccagctgcgcgcgctgaac
cccgaggcccggctgatcgtgcgccacgcccatgcgggcaccgccctgccgcgcctggcc
gacgagcttcacgtgcaggcggtgtacgccagccacgacgacgaacccgccgcgctggcc
cgcgaccacgccgtgcgcggtgccctcgcggaaatgggcatcgcgctgcacacggcgaag
gaccatgtgatcttcgagcgcaacgaggtgctgaccgccaccggcaagccctacagcgtg
ttcacgccctacaagaacgcctggctgaagaagctggagccgttctacctgaaggcctac
ccggtggcccgttacgccgacgcgctggcgcccctgcccgacgacgtgccggcccacctg
cccacgctgagcggcatcggcttcgaacccaccaacctgcacgagctggcgctgggcgcc
ggcagcgagggcgcccaggccctgctggccgacttcctgccccgcatcgaccgctacgac
gtggcccgcgacttcccgtcggtgaagggcccgagctacctgtcgatgcacctgcgcttc
ggcaccgtctccatccgccagctggcccgcgaggcccacgcccaccgctcgaagggcgcg
cagacgtggttgtccgaactggtgtggcgcgacttctaccaccaggtgctgcaccatcat
ccgcacgtggcggagtccgccttcaagcccgcgtacgacgccatcaagtgggagcgtggc
aaacacgccgacaccctgttcgccgcctggtgccacggccgcaccggctacccgctggtg
gacgccgcgatggcccagatcaaccagaccggctacatgcacaaccgcctgcgcatggtg
gtggcgagtttcctcgtgaaggacctcggcatcgactggcgccgcggcgaagcgtacttc
gccgaaaagctcaacgacttcgacctcgccgccaacaacggcggctggcagtgggctgcc
tccaccggctgcgacgcgcaaccgtacttccgcatcttcaaccccatcacgcagagcgag
aagttcgaccccgagggcaagttcatccggcgctacctgcccgaactggccgggctgtcg
aacaaggcgatccatgcgccgtggctggcgcgccccctcgagctggcggaggcgaggatc
gtgatcgggcaggactacccggcgcccatcgtggaccacgacgaagcgcgggcgaagacg
ctggcgaggtatgcggtggtgaaggccggcgattga
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