Ruminococcus gauvreauii: NQ502_02490
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Entry
NQ502_02490 CDS
T08490
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rgv
Ruminococcus gauvreauii
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgv03016
]
NQ502_02490 (truB)
Enzymes [BR:
rgv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NQ502_02490 (truB)
Transfer RNA biogenesis [BR:
rgv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQ502_02490 (truB)
Prokaryotic type
NQ502_02490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3203
YmzC
Motif
Other DBs
NCBI-ProteinID:
UWP59948
UniProt:
A0ABY5VIS6
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All DBs
Position
complement(515658..516572)
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AA seq
304 aa
AA seq
DB search
MNGIINIYKEAGYTSHDVVAKMRGILKQKKIGHTGTLDPDATGVLPVCLGKATKLCDMLT
DENKTYEVVLRLGITTDTQDMSGSVLKTREVGISEQEAADCIGSFVGEYMQVPPMYSALK
VNGKKLYELAREGKTVERKARPVHFYEICILGMELPKITLRVTCSKGTYIRTLCHDIGEK
LGCGACMESLVRTRVGRFAIEESFTLTQLERMAAEETAVNAVVPIDAMFEQYPPVRVVQS
SRQRVYNGNSFSEKDLEIPGIHLRDDQCVRAYDGEGTFIGIYRYDGKTHEFRLVKMFRDG
SSER
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtattatcaatatctataaagaggcgggatatacctcgcatgatgttgtggcg
aaaatgagagggattctgaaacagaagaaaatcggacatacgggaacgctggacccggat
gcaaccggtgttcttccggtatgcctcggaaaagccacgaagctgtgtgacatgctcaca
gatgagaacaagacgtatgaggtggttctgcgtctcgggatcacgacggatacgcaggat
atgagcggcagtgtgttaaagacacgggaagtcggtataagcgaacaggaagcagcagac
tgcataggctcttttgtcggagaatatatgcaggtgccgcctatgtattcggcgctgaag
gtcaacgggaaaaaactttacgagcttgcccgggaggggaaaacagtggagagaaaagcc
aggcctgtacatttttatgaaatctgcatacttggtatggagctccccaaaatcaccctg
cgggtgacctgctctaaggggacgtatattcgaactctgtgtcacgacatcggtgaaaaa
ctgggctgcggggcatgcatggaatccttagtgcggaccagggtggggcgctttgccatt
gaagagagcttcacgctgacacagctggagcggatggcggctgaagaaacggcggtgaat
gcggttgtgccgatcgatgccatgtttgagcagtatccgccggtgcgggtagtacagtca
tccagacagcgcgtatataatggaaattcattttccgaaaaggatctggagatcccgggg
attcatctgagggatgatcagtgtgtccgggcatatgacggggagggtactttcataggc
atctaccgctatgatggaaaaacccacgaatttcgcctggtaaaaatgttcagagacggg
agcagcgaaagatga
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