Ruminococcus gauvreauii: NQ502_03985
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Entry
NQ502_03985 CDS
T08490
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rgv
Ruminococcus gauvreauii
Pathway
rgv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ502_03985 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgv03400
]
NQ502_03985 (uvrB)
DNA repair and recombination proteins [BR:
rgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ502_03985 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ502_03985 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
AAA_22
FlaG
EAD9
MscS_porin
AAA_16
DUF4368
ZYG-11_interact
UB2H
NAGLU_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
UWP61355
LinkDB
All DBs
Position
complement(826705..828699)
Genome browser
AA seq
664 aa
AA seq
DB search
MKGGAGFQLHSEYQPTGDQPQAIDQLVQGFREGNQCQTLLGVTGSGKTFTMANVIQQIQK
PTLIIAHNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIAKDSAINEE
IDKLRLSATAALSERRDVIIISSVSCIYGIGSPKDYQNMIISLRPGMEKDRDAVLRELID
IQYDRNDMDFHRGTFRVRGDVVEIFPADATDIAYRVEFFGDEIERITEIDTLTGEILHEM
NHVAIFPASHYVVPMDKILASAREIEVELEEQVRFFKSEDKLLEAQRIQERTNFDLEMMK
ETGFCSGIENYSRYLAGLAPGEAPYTLMDYFEDDYLLIIDESHKTVPQIRGMYAGDQSRK
STLVDYGFRLPSAKDNRPLNFTEFEEHIDQVMFVSATPGEYEADHEMLRAEQIIRPTGLL
DPDVEVRPVEGQIDDLVAEVYKEVDKHNKILITTLTKRMAEDLTDYMKNLGIRVKYLHSD
IDTLERTEIIRDMRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTI
GRAARNAEGHVIMYADQMTDSMKVAIEETKRRREIQEAYNKEHGITPKTIQKAVRDLISI
SKEVAKTEKNLAKDPESMSRKELEQLVASLEKQMRAAAADLNFEVAAELRDKMVELKKNL
EDIE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggtgccggcttccaattacactcggaatatcagcccaccggagaccagccg
caggctatcgatcagcttgtacaggggttccgggaaggaaaccaatgccagacactgctg
ggagttaccggatccggcaagacatttacgatggcgaatgtcatccagcagattcagaaa
ccgacgctgatcatcgcacataataagaccctcgcagcgcagctctacagtgagttcaag
gagttttttccggagaatgcggtggagtattttgtctcctactacgattactatcagccg
gaggcctatgttccctctactgacacgtatattgcaaaggattccgccatcaacgaagag
atcgacaagctgcgtctgtcggcgacggccgcattgagtgaacgccgggatgtgatcatc
atatccagtgtatcctgcatctacggtattggtagtccgaaagattaccagaacatgatc
atctccctgcggcccggaatggaaaaagaccgtgacgcggtgctcagagagctgatcgac
atccagtatgacaggaatgatatggattttcaccgcggtacgttcagagtccggggggat
gtggtggaaatctttccagcggatgcgacggacattgcataccgtgttgaatttttcgga
gatgagattgaacggattactgagattgatacgctgacgggtgaaattctgcatgagatg
aatcacgttgcgatctttcctgcatcacattacgtcgttcccatggataaaatactggct
tccgccagggagatagaagttgagctggaagagcaggtccgtttctttaagagtgaagac
aagctgctggaggcacagcgcatacaggagcggaccaacttcgacctcgagatgatgaag
gaaacggggttttgctccggcattgagaattactcgcgttatcttgcaggactcgcaccg
ggagaggcaccatacacgctgatggattattttgaagacgactatctgctgatcatagac
gagtcccataagacggtcccgcagattcgcggcatgtatgccggcgaccagtcgcggaag
tcgacgctggtggattacggatttcgcctgccttcggcgaaagataaccgtccgcttaat
tttacggaatttgaagagcatatcgatcaggtgatgtttgtatcggcgactccaggagaa
tatgaagcagatcatgagatgctgcgggctgaacagatcatccggccgaccgggcttctg
gacccggatgtcgaagtgcgtccggtggaggggcagatcgatgacctggtagctgaggtc
tataaagaagtggacaaacataataaaattctgataaccacactgacgaagcgtatggcg
gaagatctgacagattatatgaagaatctcggcattcgggtcaagtaccttcactctgat
atcgatactctggagcggacggagatcatccgtgatatgcgcctcgatgtgttcgacgta
cttgtgggaatcaaccttctgagagaggggctggatatcccggaaatcactctggtggcg
atactggatgcggataaagaaggatttctgcgctccgagacatcgctgattcagacaatc
gggcgggcggccagaaatgcggaaggccatgtcatcatgtatgccgaccagatgacagat
tctatgaaagtggcgattgaggagacaaaacgccgtcgggagatacaggaggcatataac
aaagaacacggaatcactccgaagaccattcagaaagcggtgcgtgatctgatcagcatc
tccaaagaagtggcaaagacagagaaaaatctggccaaagatccggagtctatgagcagg
aaagaactggaacagctggttgcgagcctggaaaaacagatgagggcggcggctgcagat
ctgaatttcgaggttgcagctgaactgcgtgataaaatggtggagctgaagaaaaacctg
gaagatatcgaataa
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