Ruminococcus gauvreauii: NQ502_04655
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Entry
NQ502_04655 CDS
T08490
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rgv
Ruminococcus gauvreauii
Pathway
rgv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ502_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgv03400
]
NQ502_04655
Enzymes [BR:
rgv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NQ502_04655
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQ502_04655
DNA repair and recombination proteins [BR:
rgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQ502_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_6
zf-FPG_IleRS
Zn_ribbon_TFIIB
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UWP60350
LinkDB
All DBs
Position
complement(964100..964927)
Genome browser
AA seq
275 aa
AA seq
DB search
MLEIPESLTIARQLNDTVMGKRITEVETEHTKHGFAWYTKTPQEYQHIMEGKTVGETCGI
GSMVEMTLDEYRFVAGDGTNLRFYPAGEKLPAKYQMRITFADDSSLLCTVQMYGVMSLFQ
PETYDNFYYQVAKEKPMPCTDAFDPAYFRSLRDEAGENISMKTFLATNQRIPGLGNGVLQ
DILLESGLHPKQKIGRLQNSDWKRVYGAVTGILQKMIEAGGRDTEKDLYGESGGYCTRLS
KKTAGKPCPYCGTAIQKATYLGGTVYFCPECQKMR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaataccggagagtttaacaattgcaagacaactgaatgatacggttatgggc
aagcggatcactgaagtcgagacggagcacacaaaacacggtttcgcatggtacacgaag
acgccgcaggagtaccaacatattatggaaggaaagacggtgggggaaacctgtggaatc
ggcagtatggtggaaatgacgctggatgaataccggttcgtggccggggacggcacgaac
ctcagattctatccggcgggagaaaaactgcccgcaaagtatcagatgcggatcaccttt
gcggatgacagttctctgctttgcacagtgcagatgtatggggttatgtcactgtttcag
ccggaaacgtatgacaacttttactatcaggtggcaaaagaaaaaccgatgccgtgtacc
gatgcgtttgaccctgcatattttcgttcactccgcgacgaggcaggcgaaaacatttcg
atgaagacttttcttgcaacgaatcagaggattccgggattgggaaatggagtacttcag
gatatcctgctggaatcggggctgcatccaaaacagaaaatcggaaggcttcaaaattcc
gattggaagagggtatatggggctgtcacggggatactccagaagatgattgaagccgga
ggcagggatacggaaaaggatctttacggcgaaagcggcggttattgtaccagattaagt
aagaaaacagcaggaaaaccgtgtccgtactgtggaactgccatacagaaggcaacttat
ctgggagggactgtttatttctgtcccgagtgccagaaaatgcgttaa
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