Ruminococcus gauvreauii: NQ502_05290
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Entry
NQ502_05290 CDS
T08490
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
rgv
Ruminococcus gauvreauii
Pathway
rgv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ502_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgv03400
]
NQ502_05290
Enzymes [BR:
rgv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NQ502_05290
DNA repair and recombination proteins [BR:
rgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NQ502_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UWP60456
LinkDB
All DBs
Position
complement(1081848..1082684)
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AA seq
278 aa
AA seq
DB search
MLMIGSHLSSAKGFLHMGREAVRIGANTFQFFTRNPRGSRAKELDLQDVAAFLAYAKGAR
INTVLAHAPYTLNPCSKEEKTREFAKMTMEDDLRRMEHLPGNYYNFHPGSHTGQGADRGI
EQIVSQLNELLRHDQSTTVLLETMAGKGTEIGGRFEEIRAILDGVDCSEKMGVCMDTCHV
YDAGYDIVGHLDDVIGEFDRVVGLTRLKAIHLNDSMNPIGSHKDRHEKIGEGSIGLEAFE
KLINHPALRGLPFYLETPNELDGYAQEISILRSRYRCE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgataggaagtcacttatcctccgcaaaaggttttctgcatatggggcgtgag
gcagtcaggatcggtgccaatacgtttcagttttttaccaggaatcccagggggagcaga
gcaaaagaactggatcttcaggatgtggcagcgtttttggcctatgcgaaaggcgccaga
ataaacacggtcctcgcgcatgcgccgtataccctgaacccttgctccaaggaagaaaag
accagggaatttgcaaagatgaccatggaagacgatctgcgcagaatggaacatctgccg
gggaattattataattttcatccgggcagccataccggacagggggcggacagaggaata
gaacagattgtatctcagctgaatgagctgctcagacacgatcagtcgacaactgtgctg
ctggagacaatggccggtaaagggacagagatcggaggacgtttcgaggagatccgtgcg
attttagacggtgtggactgcagtgagaagatgggcgtctgtatggatacgtgtcacgta
tatgatgcgggttacgatattgtcggtcatctggatgacgtgatcggggaatttgaccgg
gtggtcggacttacccggctgaaggcgattcatctgaatgacagcatgaatccgattggc
agccacaaagaccgccatgagaaaatcggagagggcagcatcggactggaggcgtttgaa
aagctgatcaaccaccccgcactgcgtgggctgccgttctatctggagacgccaaatgag
ctggacggttatgcacaggagatcagcattctgagatcccgatatcgatgtgagtga
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