Ruminococcus gauvreauii: NQ502_06260
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Entry
NQ502_06260 CDS
T08490
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rgv
Ruminococcus gauvreauii
Pathway
rgv00300
Lysine biosynthesis
rgv00470
D-Amino acid metabolism
rgv01100
Metabolic pathways
rgv01110
Biosynthesis of secondary metabolites
rgv01120
Microbial metabolism in diverse environments
rgv01230
Biosynthesis of amino acids
Module
rgv_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQ502_06260 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NQ502_06260 (dapF)
Enzymes [BR:
rgv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NQ502_06260 (dapF)
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Motif
Pfam:
DAP_epimerase
CntK_N
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UWP60631
UniProt:
A0ABY5VK77
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All DBs
Position
complement(1288731..1289564)
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AA seq
277 aa
AA seq
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MKFTKMHGIGNDYVYVNCLKETVDDPCETARFISDRHFGVGSDGLILIKPSDKADFMMDM
YNSDGSQGAMCGNGIRCVAKYVYDYGLTDKTRIAIETKSGIKYLDLTLSEGLVSTVRVNM
GAPDLKAGRIPIISDHDNVVNEPIEVGGQVYRMTGVSMGNPHAVVYMEDVAGLEIEKTGP
MFENHPRFPDRINTEFVRVIDRGLVEMRVWERGSGETLACGTGACAVAVASALNGYTADE
ITVKLLGGDLTVCWDREENQVYMTGPATVVFDGEIEI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacgaaaatgcacggcattggaaatgattatgtttatgtaaactgtctgaag
gagacggtggacgatccgtgtgagacggccagatttatcagcgaccgccatttcggcgtg
ggctccgatggcctgatcctgatcaaaccttctgataaggcagactttatgatggatatg
tataattccgacgggtcccagggcgcgatgtgcggaaacggcatacggtgtgtggctaag
tatgtctatgattacgggctcacggacaaaacccggatcgccatcgagacgaagagcggg
atcaaatatctggacctgacgctttcggaagggctcgtttccacggtgagggtgaacatg
ggagcccccgatctgaaagcggggaggattcccatcatttccgatcatgacaatgtggtg
aatgaaccgattgaggtcggcgggcaggtgtaccgtatgaccggggtttccatggggaat
ccgcatgcggtagtatatatggaagatgttgcagggctggaaatagagaagacagggccg
atgttcgagaatcatccgcgttttccggaccggatcaatacggagttcgtgcgcgtgatc
gaccgcggcctggtggaaatgcgcgtatgggagcgcgggtcgggtgagacacttgcgtgc
ggcacaggggcctgtgcggtagctgtcgccagcgctctgaatggctatacggcggatgag
atcaccgtgaaactgctcggcggggatctgactgtctgctgggaccgggaggagaatcag
gtttatatgaccggacctgcaacggtggtatttgacggagaaattgagatctga
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