Ruminococcus gauvreauii: NQ502_17315
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Entry
NQ502_17315 CDS
T08490
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rgv
Ruminococcus gauvreauii
Pathway
rgv03410
Base excision repair
rgv03430
Mismatch repair
rgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ502_17315 (recJ)
03430 Mismatch repair
NQ502_17315 (recJ)
03440 Homologous recombination
NQ502_17315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgv03400
]
NQ502_17315 (recJ)
DNA repair and recombination proteins [BR:
rgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NQ502_17315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NQ502_17315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ502_17315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF34_NIF3
Motif
Other DBs
NCBI-ProteinID:
UWP59102
UniProt:
A0ABY5VFF4
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All DBs
Position
3680017..3681729
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AA seq
570 aa
AA seq
DB search
MERWVIAAKKADFKRTAELFHIDQVTARLIRNRDVTGDEAIRRYLHGDLSELPSWKAMKG
VAEAVDILRDKIRMRRPVRIIGDYDIDGVTASYILQKGLERVGARVDVMIPDRITDGYGI
NESLIAAAAQDGIDTIVTCDNGIAAAAQIQTAKELGLTVIVTDHHEVPYMEQGDGKVFLL
PPADVVINPRQEGCDYPFKQLCGACVGMQLVSGLYDSFGIDEREMEEFLEFAAIATIGDV
MDLTGDNRILVKEGMERLRHTMNRGLQALIAANGLDQQQLSPYHIGFVIGPCLNAGGRLD
TARRSLALLNAKTVEEAERLAADLKALNDERKDMTEQGVARAVEMVEHSSLCRDRVLVIY
LPECHESLAGIIAGRLRERYHKPSIVLTRTQEGVKGSGRSIEAYSMYDELVRVKDLLTKF
GGHPMAAGLSLGEADVPEFRKRLNELCTLQEEDLAEKVVIDAAMPIGYIRKDLVREFELL
EPFGKGNTRPLFALRQVRMLECRIFGKNRNVVKMKVMDDQGYSIDGVYFGDGDGFVNDVR
NKGRLNVVYYPSVNSYRGRENLQIVITHYQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatgggtaattgctgcaaagaaagcagattttaagagaacagctgaattattt
catatcgatcaggtgactgccaggctgatcagaaaccgggatgtgaccggtgacgaggcg
atccggcgctatctccacggagaccttagtgaactgccctcatggaaggcgatgaaggga
gtcgcggaggcggtcgatatcctgagggacaagatccggatgcggcggccggtgcgcatt
atcggtgactatgatatcgacggcgtgacggcctcctacattcttcagaagggactggag
agagtcggagcacgcgtggacgtgatgatcccggaccggatcacagacggatacggcatt
aatgagtcactgatcgcagccgctgctcaggacggtattgatacaatcgtgacatgtgac
aacggcatcgcggctgcggcgcagattcagacggcgaaggaacttggactgacagtgatt
gtcacagaccatcatgaggtgccgtatatggaacagggggacggaaaggtgttcctcctg
ccgcccgccgatgtggtcatcaatccccggcaggaagggtgtgactatccgttcaaacag
ctgtgcggagcctgtgtcgggatgcagctggtgtccgggctgtacgacagtttcgggatc
gatgagagggagatggaagaattcctggagtttgctgcgatcgcaacgatcggagatgtg
atggatctgacaggggacaacaggattctggtaaaagaaggaatggagcggctgaggcac
acgatgaacaggggcctgcaggcactgattgcggcaaacgggctggatcagcagcagctg
tcgccttatcatatcggatttgtcatcggaccatgtctgaatgcgggtggaagactggac
accgccaggcgctccctggcacttctcaatgccaaaaccgtggaagaggcagagaggctg
gcggcagatctgaaggcgctcaatgatgagcgaaaagatatgacggaacagggcgttgcc
cgggcagtcgaaatggtagagcacagttcgctgtgcagggaccgggtactggtgatctat
ctgccggaatgccatgagagtctggcgggcatcattgcggggaggctgcgtgagcggtac
cacaagccctcgatcgtgctgacaaggactcaggagggagtcaagggctccgggcgctcg
attgaggcatactccatgtatgatgaactggtcagggtaaaagatctgctgacgaaattc
ggaggacatccgatggcagccggtctttcgctcggggaagcagacgtgccggaatttcgg
aaacggctgaatgagctctgtaccctgcaggaagaagacctggcagaaaaggtggtcata
gatgccgcgatgccgatcggatacatacgcaaagacctggtgcgggaatttgagcttctg
gagcctttcgggaaaggaaataccaggccattgtttgcactgagacaggtcaggatgttg
gaatgccggatttttggcaagaatagaaatgtggtcaaaatgaaggtgatggatgaccag
ggatattccatagacggcgtatattttggtgatggagacggcttcgtaaatgatgtcagg
aacaaaggaagactgaacgtcgtttattatccatccgtcaattcttaccgcggaagggaa
aacctgcagattgtgatcacacattaccagtga
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