Rhodococcus jostii: RHA1_ro00990
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Entry
RHA1_ro00990 CDS
T00382
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rha
Rhodococcus jostii
Pathway
rha03030
DNA replication
rha03410
Base excision repair
rha03420
Nucleotide excision repair
rha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHA1_ro00990 (polA)
03410 Base excision repair
RHA1_ro00990 (polA)
03420 Nucleotide excision repair
RHA1_ro00990 (polA)
03440 Homologous recombination
RHA1_ro00990 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rha03032
]
RHA1_ro00990 (polA)
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro00990 (polA)
Enzymes [BR:
rha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHA1_ro00990 (polA)
DNA replication proteins [BR:
rha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHA1_ro00990 (polA)
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHA1_ro00990 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHA1_ro00990 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ABG92818
UniProt:
Q0SI18
LinkDB
All DBs
Position
complement(1052495..1055239)
Genome browser
AA seq
914 aa
AA seq
DB search
MSPATTPRSTTSPASGAAASSDDRPTLMLLDGHSLAFRAFYALPAENFKTHSGQVTNAVY
GFTSMLINLLRDEQPSHVAAAFDVSRQTFRAEKFPEYKANRSKAPDEFKGQVEITKDVLG
ALGIPVMAEEGFEADDIIATLTTQAEALGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSD
LTRFTPAAVEEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVD
NVDKVRGKVGDALRENLPNVLLNRELTEMVRDVPLPYTPDQLMLAQWDREKIHALFDDLE
FKVLRDRLFATLAPVEAEAEEGFEVRGSALDPGAVADWLSAHASTGERSGVSVVGTRTPY
GGDVTAIAVAAADGEGAYIATASATPEDEKALGDWLADADQPKALHEAKWAMHALRGRGW
VLGGLTSDTALAAYLVRPGQRTFNLDDLSLRYLRRELRVEETGEEQLSLLDDADQVDAEA
AETEILSARAVLDLAAALDTELDNIESTALLSEMELPLLEVLADIEASGIAVDGTHLHDL
QSRFAAEVSAAAEAAYGVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDAEALQN
LFEKTSHPFLEHLLAHRDATRLKVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNL
QNIPVRTDAGRQIRDGFVVGEGYDSLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLHS
FVGARAFGVPIEEVTPELRRRVKAMSYGLAYGLSAFGLAAQLKISTEEAKSQMEAYFARF
GGVRDYLHEVVEQARKDGYTSTLYGRRRYLPDLTSDNRQRREVAERAALNAPIQGTAADI
IKVAMINVQRSLRDAGLKSRMLLQVHDELVLEVVDSEREQVEQLVRDKMSSAIELSVPLD
VSVGTGRSWDAAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgcaaccaccccccggtccaccacgtcccccgcgtccggcgcagcagcgtcg
tccgacgatcgccccaccctgatgctgctcgacggccactcgctggccttccgtgcgttc
tacgccctgcccgccgagaacttcaagacacacagcggtcaggtcaccaacgccgtctac
gggttcacgtcgatgttgatcaacctgctgcgcgacgaacagcccagccacgtggcggcg
gcgttcgacgtgtcgaggcagacgttccgggccgagaagttcccggagtacaaggccaat
cgcagcaaggcgccggacgagttcaaggggcaggtcgagatcaccaaggacgtcctcggg
gccctcggcatcccggtgatggccgaggaaggcttcgaggccgacgacatcatcgccacg
ctcaccacccaggccgaggcgctcgggtaccgcgtcctcgtggtgaccggcgaccgggac
tcgctccagttggtcaccgacggggtcacggtgctctacccgaagaagggcgtctcggac
ctcacccggttcacgccggcggccgtcgaggagaagtacgggctcacacctgcgcagtac
cccgacttcgcggcgctgcgcggcgacccgagcgacaatctgccgggcatcccgggggtg
ggggagaagaccgccaccaagtggatcaaggagtacggcgatctcgtcggcctggtcgac
aacgtcgacaaggtccgcggcaaggtcggtgacgcgctgcgggagaacctgccgaacgtg
ctactcaaccgggaactgaccgagatggtgcgcgacgtcccgttgccgtacaccccggac
cagctgatgctcgcgcagtgggatcgggagaagatccacgcgctgttcgacgacctcgag
ttcaaggtgctgcgcgaccggctgttcgccacattggcccccgtcgaagcggaggccgag
gagggcttcgaggtgcgggggagcgcgctcgatcccggggcggtcgcggactggctgtcg
gcgcacgcgtcgacgggcgagcgatccggcgtgtcggtggtcggcacccgcaccccgtac
ggcggtgacgtgacggcgatcgccgtcgccgccgcagacggcgagggcgcctacatcgcc
accgcgtccgccaccccggaggacgagaaggcgctcggcgactggctcgcggacgccgat
cagccgaaggccctgcacgaggccaaatgggcgatgcacgcactgcgcggacgcggctgg
gtgctcggtggtctcaccagcgacaccgcgctggcggcctacctggtgcgtcccgggcag
cggacgttcaacctcgacgacctgtcgctgcggtacctgcgcagggagctgcgggtggag
gagaccggcgaagagcagctgtcgctgctcgacgacgccgaccaggtcgacgcagaagcc
gccgagaccgaaattctcagcgcccgcgccgtcctcgacctcgcggccgcgctcgacacc
gaactcgacaacatcgaatcgacggcgctgctgtccgagatggagttgccgctgctggag
gtgctggccgacatcgaggcgtccggtatcgccgtcgacggcacccacctgcacgacttg
cagagccggttcgcggccgaggtctccgcggcggcggaggcggcctacggggtcatcggc
aagcagatcaacctcggctcgcccaagcagctgcaggtcgtgctgttcgacgagctggag
atgcccaagacgaagaagacgaagaccgggtacaccacggacgccgaggcgttgcagaac
ctgttcgagaagacgtcgcacccgttcctcgagcacctgctcgcgcaccgcgacgcgacg
cggctgaaggtcaccgtcgacggtctgctgaagacggtcgccgaggacgggcggatccac
acgacgttcaaccagaccgtcgcggccaccggccggctgtcgtcgaccgagccgaacctc
cagaacatcccggtgcgcacggatgcgggccggcagatccgggacggcttcgtcgtcggc
gagggctacgattcgctgctcacggccgactacagccagatcgagatgcggatcatggcc
cacgtgtccggtgacgagggcctgatcgaggcgttcaacaccggcgaagacctgcacagc
ttcgtcggcgcgcgtgcgttcggcgtcccgatcgaggaggtcacaccggagctgcgccgc
cgggtgaaggcgatgtcgtacgggctggcgtacgggctgagcgcgttcggtctggccgcc
cagctcaaaatctcgaccgaagaggccaaatcgcagatggaggcgtacttcgcccggttc
ggcggggtacgcgactacctgcacgaggtcgtcgaacaggcccgcaaggacggctacacg
tcgacgctgtacgggcgtcgccgctacctgcccgacctcaccagcgacaaccgccagcgg
cgggaggtcgccgagcgcgccgcgctcaacgcccccatccagggcacggccgccgacatc
atcaaggtcgcgatgatcaacgtgcagcggtcactgcgcgacgcgggcctgaagtcgcgg
atgctgctgcaggtccacgacgagctggtgctcgaggtcgtcgattcggaacgggaacag
gtcgaacagctggtccgcgacaagatgtcctcggctatcgaactgtcggtgccgctcgac
gtgtccgtcggcaccggtcgcagctgggacgccgccgctcactag
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