Rhodococcus jostii: RHA1_ro01056
Help
Entry
RHA1_ro01056 CDS
T00382
Name
(GenBank) probable glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rha
Rhodococcus jostii
Pathway
rha00500
Starch and sucrose metabolism
rha01100
Metabolic pathways
rha01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RHA1_ro01056
Enzymes [BR:
rha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RHA1_ro01056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ABG92883
UniProt:
Q0SHV3
LinkDB
All DBs
Position
1119719..1121980
Genome browser
AA seq
753 aa
AA seq
DB search
MEASESTGTTPIPVWPGSAYPLGATYDGAGTNFSLFSEVAEAVDLCLIAKDGTETRIRLD
EVDGYVWHAYLPTVVPGQRYGYRIHGPWDPSAGHRCDPSKLLLDPYGKAFDGEFDGDRSL
FSYDIDAPAEAAPDESEDAALLVDTDDDIEAEDEAGAELAAEPEETSAPGLPGHDSLGHT
MTTVVINPFFDWAADRAPKHPYHDTVIYEAHVKGMTATHPGVPEELRGTYAGLAHPVIID
HLVDLGVTAIELMPVHQFMHDQTLLDKGLRNYWGYNTFGFLAPHTGYSSAEKPGAAVSEF
KAMVRSFHEAGIEVILDVVYNHTAEGNHLGPTISFRGIDNAAYYRLVDGDAEHYMDYTGT
GNSLNARHPHTLQLIMDSLRYWVTEMHVDGFRFDLASTLARELHDVDRLSAFFDLVQQDP
IVSQVKLIAEPWDIGEGGYQVGNFPGLWTEWNGKYRDTVRDYWRGEPATLGEFASRLTGS
SDLYEATGRRPGASINFVIAHDGFTLHDLVSYNEKHNEANGEGNNDGESHNRSWNCGVEG
PTDDPEILDLRGRQSRNILATLLLSQGTPMLAHGDEMGRTQQGNNNVYCQDSELSWMDWS
LADANADLVEFTKRVIALRMKNPVFRRRRFFEGTPIRSGDQTRDIAWLTPAGEEMTPEDW
DSGFGKSLAVFLNGEGIPEPNHRGERVVGDSFLLCFNAHDEEIEFSTPNSDYADEWAVVL
DTAVPTGAKEAVIKAGDPLQVEARSLVVLRRTA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagcgagtcgaccggcaccacgcccattcccgtgtggcccggcagcgcctac
ccactgggcgccacctacgacggagccgggacgaacttctcgttgttctccgaggtcgcc
gaggcggtcgatctgtgcctgatcgcgaaggacggcaccgagacgcggattcgcctcgac
gaggtcgacggttacgtgtggcacgcgtacctgccgaccgtcgttcccggtcagcggtac
gggtaccggatccacggcccctgggatccctctgccgggcaccgctgcgaccccagcaag
ctcctcctcgacccctacggcaaggcgttcgacggcgagttcgacggagaccggtccctg
ttctcctacgacatcgacgcgcccgccgaggccgcccccgacgaatcggaggacgccgcc
ctactcgtcgacacggacgacgacatcgaggcagaggacgaggcgggggccgagctcgcg
gcggaacccgaggagacctcggcgcccggactgcccggacacgactcgctcggccacacg
atgacgacggtggtgatcaacccgttcttcgactgggctgccgaccgcgcaccgaagcac
ccgtaccacgacaccgtgatctacgaggcccacgtcaagggcatgacggcgacgcatccc
ggtgtgccggaagagctccgcggcacgtatgcgggcctcgcgcatccggtgatcatcgac
cacctcgtcgacctcggggtcaccgcgatcgaactgatgccggtgcatcagttcatgcac
gatcagacgctgctggacaaggggctgcggaactactggggttacaacacgttcggcttc
ctcgccccgcacaccgggtattcgtcggcggagaagccgggcgccgcggtgtcggagttc
aaggcgatggtccgctcgttccacgaagcgggcatcgaggtcatcctcgacgtcgtctac
aaccacaccgccgagggcaaccacctcggtccgaccatctcgttccgcggcatcgacaac
gccgcctactaccggctcgtcgacggcgacgccgagcactacatggactacacgggcacc
gggaacagcctcaacgcccggcacccgcacacgctgcaactgatcatggactcgctgcgg
tactgggtcaccgagatgcacgtcgacggattccggttcgacctcgcgtccacgctcgcc
cgtgaactgcacgacgtcgaccggctctccgcgttcttcgacctcgtccagcaggatccg
atcgtcagccaggtcaagctcatcgccgaaccgtgggacatcggcgaaggcgggtaccag
gtgggcaacttcccgggcctgtggacggagtggaacggcaagtaccgggacacggtccgc
gactactggcgcggcgaacccgcgacgctcggcgagttcgcgtcccggctgaccgggtcc
tccgacctctacgaggccaccgggcgccgccccggcgcgagcatcaacttcgtcatcgcc
cacgacgggttcaccctgcacgacctggtgtcgtacaacgagaagcacaacgaggccaac
ggcgagggcaacaacgacggcgagagccacaaccggtcctggaactgcggtgtcgagggg
ccgacggacgatccggagatcctcgatctgcgcgggcggcagagccgcaacatcctggcc
accctgctgctcagccaggggacgccgatgctggcgcacggcgacgagatgggccgcacc
cagcagggcaacaacaacgtgtactgccaggactcggaactgtcgtggatggactggtcg
ctggcggacgccaacgccgacctggtcgagttcaccaaacgggtgatcgccttgcggatg
aagaatccggtgttccgtcgtcgccggttcttcgagggcacccccatccgcagcggtgac
cagacccgcgacatcgcgtggctcaccccggccggtgaggagatgacccccgaggactgg
gacagcggtttcgggaagtccctcgcggtcttcctcaacggcgagggcatccccgaaccc
aaccaccgcggcgagcgggtggtcggcgactcgttcctgctgtgtttcaacgcgcacgac
gaggagatcgagttctccacgccgaattccgattatgccgacgaatgggcggtcgtgctc
gacaccgccgtcccgacgggggcgaaggaagcggtgatcaaggccggggatccgctgcag
gtcgaggcccggtcgctggtcgtgctgcgccggacagcctga
DBGET
integrated database retrieval system
