Rhodococcus jostii: RHA1_ro01831
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Entry
RHA1_ro01831 CDS
T00382
Name
(GenBank) probable DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rha
Rhodococcus jostii
Pathway
rha03030
DNA replication
rha03430
Mismatch repair
rha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHA1_ro01831
03430 Mismatch repair
RHA1_ro01831
03440 Homologous recombination
RHA1_ro01831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rha03032
]
RHA1_ro01831
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro01831
Enzymes [BR:
rha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHA1_ro01831
DNA replication proteins [BR:
rha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHA1_ro01831
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHA1_ro01831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
Rv2179c-like
DNA_pol_A_exo1
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
ABG93642
UniProt:
Q0SFP4
LinkDB
All DBs
Position
complement(1934957..1936906)
Genome browser
AA seq
649 aa
AA seq
DB search
MFLCVIHSNDTTLDLYLNKKLPRNSGRTRYVPAIYVSSIRTTRTGLYSRSVLSSASSTMT
RPVRLPTGHRWVVVDVETSGLRSSTHRVLSVAALALREDGSVERELVTLLNPGCDPGPVH
IHNLTPQRLAGAPRFEEVANDLLELLDGRTLVAHNASFDYGFLDAEVRRAGMTMPTRQRL
CTLALSRRLEIDVPNHKLSTLAAHWKVRQNRAHDAYDDALVLTEVFAHSASLAESLRLPL
PVVGCADRRAVYPDRVPRVESPWRNPGRLDPGVGLVQGMKLVISGSTDVPRLSLAARLTA
AGLDVMNSVSRQTGVVVCNDPHSSSAKVRRAVADGIPVLTERQLGEMLLHVTPGEPKAAA
APSEVQRPRPATTVPSTKPWHGRRVLIVGGSHADSVLMRSRIVQLGAKPSVNLSAGVTDV
LVLDGGELDPRMDRVSARQLPLLTAPDVNSALEPAAPPARGALREPIRPPSQWVAPLLAR
GEVIDLPPQTTSLTVNASWRAHTEDDAFDVDVVALLLGDDGRVGCDEDFLFYNSPTSSDG
TVELSCDGSSEQGVRIELAALHSDYQCVSVSAAIGGDRTFGELGPISVTVDAPDRTIASF
VLDAGTTERTMHFAEIYRRAEQWRLRAVGQGYEYDLATLATEYGVTVDD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctgtgtcattcactcgaatgacacaaccctcgacctgtacttgaacaaaaaa
ctaccgagaaattcgggtcggacgcgatatgtgccggcgatttacgtgtcgtcgatcaga
acgacgagaactgggctctatagtcgctctgtgctttcatctgcctcctcgaccatgacc
cggccggtgcgattgccgacggggcaccgctgggttgtcgtggatgtcgagacctccggt
ctgcgttcgtccacgcacagagtgctcagcgtcgcggcgttggcgttgcgtgaagacggt
tcggtggagcgtgaattggtgactctgctcaacccgggctgcgacccgggaccggtacat
atccacaatctcacgccacagcgtttggcgggggcgccccgtttcgaagaggtcgcgaac
gatctgctcgaacttctcgacggtcggacgctggtcgcccacaatgcgtcattcgattac
ggcttcctcgacgccgaggtacggcgggccgggatgacgatgccgacacggcagaggctc
tgcacccttgccctgtcccgccgcctcgagatcgacgtccccaaccacaagttgtcgact
ctggccgcgcactggaaggttcgtcagaaccgggctcacgacgcttacgacgacgccctc
gtgctgacggaggtcttcgcacacagcgcctcgctcgccgagtctctcagacttcctctg
ccggtcgtcggctgcgccgatcggcgggcggtatacccagatcgggttccgcgtgtggag
tctccgtggcggaatccgggtcggctggatccgggggtgggactggtccagggcatgaaa
ctggtcatcagcggcagcacggatgttcctcgtctttcgctcgccgcacgtctgaccgcc
gccggcctggacgtcatgaattcggtcagccgtcagacgggcgtcgtcgtctgcaacgac
ccgcactcgtcgagtgcaaaggtgcgccgcgcggtggccgacgggattcctgtcctgacc
gagcggcagctcggcgagatgttgctgcacgtgacaccgggtgagccgaaggcggccgcg
gcaccgtccgaagttcagcggcctcgacctgcgacaactgttccctccacgaagccttgg
cacggaagaagagtgctcatcgtcggtggctcgcatgcggactccgttctgatgcgctcc
cgcatcgtgcagctgggtgccaagccgtcggtcaatctctccgcaggagtcaccgatgtc
ctcgttctcgacggtggtgaactcgatccccgcatggaccgagtgtcggcccgtcagttg
cctctgctcaccgcccccgatgtgaactccgcactcgaaccggcggcaccacccgcgcgg
ggggcgctccgcgagccgatcagaccgccttctcagtgggttgcgccgttgctcgctcgc
ggagaggtgatcgacctgccaccacagacgacatcgctgacggtcaacgcgtcttggcgc
gcccacaccgaggacgatgcgttcgacgtggatgtggttgcgcttcttctcggcgacgac
ggccgggtcggttgcgacgaggacttcctcttctacaactcgccgacgagttcggacggc
accgtggaattgtcctgcgacggcagcagcgagcaaggagtgcggatcgaactggctgcc
ctgcactccgactaccagtgcgtgtccgtatcggcggcgatcggcggagatcgcaccttc
ggtgaactcggtccgatctcggtgaccgtcgacgctccggaccgcacgatcgcatcgttc
gttctggacgccggcacgacggaacggacgatgcatttcgccgagatctaccgacgcgcc
gagcagtggcgtctccgcgcggtggggcaggggtacgaatacgatctcgccacgctcgcc
accgagtacggggtgacggtcgacgattga
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